RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 TEX33O43247 280 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 SARM1Q6SZW1 724 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 XXYLT1Q8NBI6 393 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 PDLIM2Q96JY6 352 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 OSBPL9Q96SU4 736 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 DIS3Q9Y2L1 958 aaKnown RBP12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 LAMC1P11047 1609 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 ALKQ9UM73 1620 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 SKOR1P84550 965 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 CCDC124Q96CT7 223 aaKnown RBP12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 POLR3CQ9BUI4 534 aaPredicted RBP12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 TRIM55Q9BYV6 548 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 ADAM22Q9P0K1 906 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 C1orf146Q5VVC0 180 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 VPS11Q9H270 941 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 STXBP3O00186 592 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 SLC16A4O15374 487 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 ARL4CP56559 192 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 FAM213AQ9BRX8 229 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 KLC2Q9H0B6 622 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 ETNK1Q9HBU6 452 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 MEFVO15553 781 aaPredicted RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 CTIFO43310 598 aaKnown RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 CDC27P30260 824 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 HADHAP40939 763 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 GPC3P51654 580 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 ZNF568Q3ZCX4 644 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 GLE1Q53GS7 698 aaKnown RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 TMEM270Q6UE05 265 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 RASSF3Q86WH2 238 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 STAMBPL1Q96FJ0 436 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 PVALEFA0A1B0GWK0 134 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 PODXLO00592 558 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 PPP2R2AP63151 447 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 ZNF699Q32M78 642 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 TTC30BQ8N4P2 665 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 TRIM15Q9C019 465 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 BARHL2Q9NY43 387 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 LCMT1Q9UIC8 334 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 CRB1P82279 1406 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 TULP4Q9NRJ4 1543 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 ATP1A1P05023 1023 aaKnown RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 TTLL4Q14679 1199 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 P4HBP07237 508 aaKnown RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 GPC5P78333 572 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 IL17RAQ96F46 866 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 TGS1Q96RS0 853 aaKnown RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 DDX47Q9H0S4 455 aaKnown RBP12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 GGT7Q9UJ14 662 aa12.98□□□□□ -0.33
CCDC144A-204ENST00000360524 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 POTECB2RU33 542 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 KCNH2Q12809 1159 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 FMR1NBQ8N0W7 255 aaPredicted RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 MMP19Q99542 508 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 PCSK1NQ9UHG2 260 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 APOBEC2Q9Y235 224 aaKnown RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 TSC22D4Q9Y3Q8 395 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 CHEK2O96017 543 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 CCDC159P0C7I6 412 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 ARHGDIAP52565 204 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 AP2B1P63010 937 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 TAF1BQ53T94 588 aaPredicted RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 FRA10AC1Q70Z53 315 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 C11orf70Q9BRQ4 267 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 LMCD1Q9NZU5 365 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 KLHL8Q9P2G9 620 aaPredicted RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 MID2Q9UJV3 735 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 SYNGAP1Q96PV0 1343 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 KIF28PB7ZC32 967 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 F8W8V4 182 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 DIAPH2O60879 1101 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 TAC1P20366 129 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 FOXO4P98177 505 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 MDM2Q00987 491 aaPredicted RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 SZRD1Q7Z422 152 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 TMEM35BQ8NCS4 154 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 BEST2Q8NFU1 509 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 ZNF564Q8TBZ8 553 aaPredicted RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 UPF3AQ9H1J1 476 aaKnown RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 C2orf40Q9H1Z8 148 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 F5H6K3 240 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 ZBTB7AO95365 584 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 KLRC3Q07444 240 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 DRP2Q13474 957 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 GFM2Q969S9 779 aaKnown RBP12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 NDE1Q9NXR1 346 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 FAM8A1Q9UBU6 413 aa12.97□□□□□ -0.33
CCDC144A-204ENST00000360524 TRPM1Q7Z4N2 1603 aa12.96□□□□□ -0.33
CCDC144A-204ENST00000360524 HUS1O60921 280 aa12.96□□□□□ -0.33
CCDC144A-204ENST00000360524 QARSP47897 775 aaKnown RBP12.96□□□□□ -0.33
CCDC144A-204ENST00000360524 SPP2Q13103 211 aa12.96□□□□□ -0.33
CCDC144A-204ENST00000360524 QRICH1Q2TAL8 776 aa12.96□□□□□ -0.33
CCDC144A-204ENST00000360524 CALR3Q96L12 384 aaKnown RBP12.96□□□□□ -0.33
CCDC144A-204ENST00000360524 SLC13A1Q9BZW2 595 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms