RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 RNF180Q86T96 592 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 FBXO16Q8IX29 292 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 FAM186BQ8IYM0 893 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCDC170Q8IYT3 715 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCAR2Q8N163 923 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 CPLX3Q8WVH0 158 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 SPATA33Q96N06 139 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 UPF3AQ9H1J1 476 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZNF215Q9UL58 517 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 PYCARDQ9ULZ3 195 aa11.75□□□□□ -0.53
TRAPPC4-201ENST00000359005 MYH11P35749 1972 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZBTB39O15060 712 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 EXOC3O60645 756 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 PQBP1O60828 265 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 GYPCP04921 128 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCDC172P0C7W6 258 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 RFX1P22670 979 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 EFNA5P52803 228 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 TERF1P54274 439 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 ADKP55263 362 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 PEX3P56589 373 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 GJA9P57773 515 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 CDK17Q00537 523 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 TFDP1Q14186 410 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 MXD4Q14582 209 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 EMC2Q15006 297 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 UGCGQ16739 394 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 MTERF2Q49AM1 385 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 C1orf53Q5VUE5 145 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 TCERG1LQ5VWI1 586 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 IQSEC1Q6DN90 963 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 SLFN12LQ6IEE8 588 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 GBP6Q6ZN66 633 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 TDHQ8IZJ6 230 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 XXYLT1Q8NBI6 393 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 SYN2Q92777 582 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 BADQ92934 168 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 KCNN1Q92952 543 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 EMID1Q96A84 441 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 STRA6Q9BX79 667 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 PRDM5Q9NQX1 630 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 AGPAT3Q9NRZ7 376 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 ERAP1Q9NZ08 941 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 MYO6Q9UM54 1294 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 GRIN2DO15399 1336 aa11.74□□□□□ -0.53
TRAPPC4-201ENST00000359005 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 GSTTP1A0A1W2PQM5 241 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 RBM47A0AV96 593 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 P4HA2O15460 535 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 ASAP2O43150 1006 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 DYNC1LI2O43237 492 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 HBP1O60381 514 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 LGR5O75473 907 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 PPP1R37O75864 691 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 LDHAP00338 332 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 ASGR1P07306 291 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 LCTP09848 1927 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 C6orf222P0C671 652 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 CST5P28325 142 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 NAMPTP43490 491 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 CDK7P50613 346 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 CASP5P51878 434 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 NKX3-2P78367 333 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 SP2Q02086 613 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 TNFAIP2Q03169 654 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 FAAP100Q0VG06 881 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 KCNH2Q12809 1159 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 MAPK7Q13164 816 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 SHHQ15465 462 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 GNASQ5JWF2 1037 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 IER5Q5VY09 327 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 PLA2G4FQ68DD2 849 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 Q7L0L9 218 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 MAEAQ7L5Y9 396 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 GLIS3Q8NEA6 775 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 DEPTORQ8TB45 409 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 BICD1Q96G01 975 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 DNAJC7Q99615 494 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 C2orf40Q9H1Z8 148 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 PLCB1Q9NQ66 1216 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 CEP72Q9P209 647 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 TBX20Q9UMR3 447 aa11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 BZW2Q9Y6E2 419 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-201ENST00000359005 MYH9P35579 1960 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 LRRC37A2A6NM11 1700 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 COL1A2P08123 1366 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 DENND3A2RUS2 1198 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 MAGEB2O15479 319 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZNF862O60290 1169 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 MAFO75444 373 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms