RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 C11orf91Q3C1V1 193 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 XKR3Q5GH77 459 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 KIAA1328Q86T90 577 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 SIX2Q9NPC8 291 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 PDLIM7Q9NR12 457 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 CEP72Q9P209 647 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
GGPS1-202ENST00000358966 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 ANKRD65E5RJM6 399 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
GGPS1-202ENST00000358966 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
GGPS1-202ENST00000358966 DGAT1O75907 488 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 ATG7O95352 703 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 TXNP10599 105 aaKnown RBP13.75□□□□□ -0.21
GGPS1-202ENST00000358966 CETPP11597 493 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 CALRP27797 417 aaKnown RBP13.75□□□□□ -0.21
GGPS1-202ENST00000358966 CNGA1P29973 690 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 ACTN2P35609 894 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 STAT5BP51692 787 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 HUNKP57058 714 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 CCDC122Q5T0U0 273 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 METTL7BQ6UX53 244 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 SPATA33Q96N06 139 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 PPP1R16BQ96T49 567 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 SUGCTQ9HAC7 445 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
GGPS1-202ENST00000358966 AKR1B10O60218 316 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 FMO5P49326 533 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 BFSP1Q12934 665 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 SEZ6Q53EL9 994 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 LMBRD2Q68DH5 695 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-202ENST00000358966 C2orf69Q8N8R5 385 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
GGPS1-202ENST00000358966 EVPLQ92817 2033 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-202ENST00000358966 KLHL33A6NCF5 533 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 ZRANB2O95218 330 aaKnown RBP eCLIP13.74□□□□□ -0.21
GGPS1-202ENST00000358966 GTF2A2P52657 109 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 KLHDC7AQ5VTJ3 777 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 BICD1Q96G01 975 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 ZBTB45Q96K62 511 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-202ENST00000358966 GPR20Q99678 358 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 EPC1Q9H2F5 836 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 HDAC6Q9UBN7 1215 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 KIF5CO60282 957 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 MAPTP10636 758 aaKnown RBP13.74□□□□□ -0.21
GGPS1-202ENST00000358966 GLRA2P23416 452 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 ADCYAP1R1P41586 468 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 SMTNP53814 917 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 GRM1Q13255 1194 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 ZKSCAN8Q15776 578 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-202ENST00000358966 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 SFMBT2Q5VUG0 894 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 TTC19Q6DKK2 380 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-202ENST00000358966 IQCEQ6IPM2 695 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 SPAG5Q96R06 1193 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 MROH8Q9H579 483 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 METTL14Q9HCE5 456 aaKnown RBP13.74□□□□□ -0.21
GGPS1-202ENST00000358966 PNMA3Q9UL41 463 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 UBE4BO95155 1302 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 PLXNB2O15031 1838 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
GGPS1-202ENST00000358966 H0YHG0 523 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 KIF2AO00139 706 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 WNT7BP56706 349 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 INHBEP58166 350 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 SARNPP82979 210 aaKnown RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 NEDD9Q14511 834 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 CELF3Q5SZQ8 465 aaKnown RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 FOXR1Q6PIV2 292 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 GBP6Q6ZN66 633 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 SEPT1Q8WYJ6 367 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 JAKMIP2Q96AA8 810 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 CARD6Q9BX69 1037 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 PACSIN1Q9BY11 444 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 TMEM206Q9H813 350 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 ADAMTS1Q9UHI8 967 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 SALL4Q9UJQ4 1053 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 IGKV6D-21A0A0A0MT36 114 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 KIF3CO14782 793 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 HNRNPH3P31942 346 aaKnown RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 CHMP4BP1P59074 171 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 IGBP1P78318 339 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 ARHGAP44Q17R89 818 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 CCDC62Q6P9F0 684 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 MAP4K3Q8IVH8 894 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms