RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
RFX3-202ENST00000358730 IL31RAQ8NI17 732 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 GLG1Q92896 1179 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 AGBL1Q96MI9 1066 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 ACCSQ96QU6 501 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 SH2D3AQ9BRG2 576 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 HSPBP1Q9NZL4 362 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 ZNF70Q9UC06 446 aaPredicted RBP9.28□□□□□ -0.92
RFX3-202ENST00000358730 SLC12A6Q9UHW9 1150 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 FEM1BQ9UK73 627 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
RFX3-202ENST00000358730 ALG6Q9Y672 507 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 CNTNAP1P78357 1384 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 P4HBP07237 508 aaKnown RBP9.27□□□□□ -0.92
RFX3-202ENST00000358730 VCAM1P19320 739 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 MARCKSL1P49006 195 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 RARRES1P49788 294 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 MXI1P50539 228 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 DLGAP5Q15398 846 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 AGBL2Q5U5Z8 902 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 C11orf63Q6NUN7 778 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 AADACL2Q6P093 401 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 TRMT1LQ7Z2T5 733 aaKnown RBP9.27□□□□□ -0.92
RFX3-202ENST00000358730 UBL4BQ8N7F7 174 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 XXYLT1Q8NBI6 393 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 KRT35Q92764 455 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 KAT5Q92993 513 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 ERP44Q9BS26 406 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 TMEM39BQ9GZU3 492 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 COL20A1Q9P218 1284 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 ZHX2Q9Y6X8 837 aa9.27□□□□□ -0.92
RFX3-202ENST00000358730 PFASO15067 1338 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 DCDC2CA8MYV0 355 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 NFIBO00712 420 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 MEFVO15553 781 aaPredicted RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 RAD17O75943 681 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 PLS3P13797 630 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 TMOD1P28289 359 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 HSD17B4P51659 736 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 PPP2R2AP63151 447 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 DHX34Q14147 1143 aaKnown RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 CLUL1Q15846 466 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 EPC2Q52LR7 807 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 JAMLQ86YT9 394 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 OTUD6BQ8N6M0 293 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 ZSWIM2Q8NEG5 633 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 CHORDC1Q9UHD1 332 aaPredicted RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 RASAL2Q9UJF2 1139 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 TMEM150BA6NC51 233 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 FAM187AA6NFU0 413 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 MIF4GDA9UHW6 222 aaKnown RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 P4HA2O15460 535 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 ATMINO43313 823 aaPredicted RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 PLA2G6O60733 806 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 PPFIA2O75334 1257 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 ICAM1P05362 532 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 HADHBP55084 474 aaKnown RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 MAGOHP61326 146 aaKnown RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 GPC5P78333 572 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 MESDQ14696 234 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 DUPD1Q68J44 220 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 RSBN1LQ6PCB5 846 aaPredicted RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 SUPT20HQ8NEM7 779 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 MAGOHBQ96A72 148 aaKnown RBP9.27□□□□□ -0.93
RFX3-202ENST00000358730 C18orf8Q96DM3 657 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 ZSWIM1Q9BR11 485 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
RFX3-202ENST00000358730 SRRM3A6NNA2 597 aaPredicted RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 PHF2O75151 1096 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 MAPTP10636 758 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 CAP2P40123 477 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 QARSP47897 775 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 PLTPP55058 493 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 C1orf220Q5T0J3 134 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 SEL1L2Q5TEA6 688 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 HAUS6Q7Z4H7 955 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 C12orf56Q8IXR9 622 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 PPM1KQ8N3J5 372 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 OGFOD1Q8N543 542 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 PLEKHO2Q8TD55 490 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 EPS8L1Q8TE68 723 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 KAT2BQ92831 832 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 VTI1AQ96AJ9 217 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 CYFIP2Q96F07 1278 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 EFCC1Q9HA90 598 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 GPRC5CQ9NQ84 441 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 CNOT8Q9UFF9 292 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 DBR1Q9UK59 544 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 SNX24Q9Y343 169 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 RPTORQ8N122 1335 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 GOLGA8IPA6NC78 632 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 GOLGA8JA6NMD2 632 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 PLSCR1O15162 318 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 SLC16A4O15374 487 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 DHX15O43143 795 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 C21orf2O43822 256 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 RTN2O75298 545 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 SGPL1O95470 568 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms