RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 MMP19Q99542 508 aa9.41□□□□□ -0.9
CTNND1-201ENST00000358694 MRPS26Q9BYN8 205 aaKnown RBP9.41□□□□□ -0.9
CTNND1-201ENST00000358694 GREM2Q9H772 168 aa9.41□□□□□ -0.9
CTNND1-201ENST00000358694 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
CTNND1-201ENST00000358694 SRPRBQ9Y5M8 271 aaKnown RBP9.41□□□□□ -0.9
CTNND1-201ENST00000358694 LRRIQ3A6PVS8 624 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 BBOX1O75936 387 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 FYNP06241 537 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 IRF1P10914 325 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 SLC7A5Q01650 507 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 KRT17Q04695 432 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 MAPRE2Q15555 327 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 PLD3Q8IV08 490 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 C1orf131Q8NDD1 294 aaKnown RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 RABGGTAQ92696 567 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ATXN7L3BQ96GX2 97 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 FOXP1Q9H334 677 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 SPTLC3Q9NUV7 552 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ZHX2Q9Y6X8 837 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 KBTBD13C9JR72 458 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ATP9BO43861 1147 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 FKBP9O95302 570 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 PCCAP05165 728 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 NR1D1P20393 614 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 TP53BP2Q13625 1128 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 SEPT2Q15019 361 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ERAP2Q6P179 960 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 FKBP9P1Q75LS8 142 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ICA1LQ8NDH6 482 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ZNF668Q96K58 619 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 SLC13A1Q9BZW2 595 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 DHX35Q9H5Z1 703 aaKnown RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ZNF302Q9NR11 478 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 TTC7AQ9ULT0 858 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 BLMP54132 1417 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ANGPT2O15123 496 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ASAP2O43150 1006 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 LCP1P13796 627 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 S100A5P33763 92 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 DPYDQ12882 1025 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 NUP93Q8N1F7 819 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 CENPTQ96BT3 561 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 FAM213AQ9BRX8 229 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 TM6SF1Q9BZW5 370 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 RPAP3Q9H6T3 665 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 LZTS1Q9Y250 596 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 FAM47E-STBD1D6RA91 191 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 AP2B1P63010 937 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 SF3B3Q15393 1217 aaKnown RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ANO5Q75V66 913 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 CDKL3Q8IVW4 592 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 UNC45AQ9H3U1 944 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 STN1Q9H668 368 aaKnown RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 NDE1Q9NXR1 346 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 UTP6Q9NYH9 597 aaKnown RBP9.4□□□□□ -0.9
CTNND1-201ENST00000358694 MRFAP1Q9Y605 127 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 ADCY9O60503 1353 aa9.4□□□□□ -0.9
CTNND1-201ENST00000358694 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 CHUKO15111 745 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 SIK1P57059 783 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 ABCE1P61221 599 aaKnown RBP9.4□□□□□ -0.91
CTNND1-201ENST00000358694 ROR1Q01973 937 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 PTPN21Q16825 1174 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 PPP1R36Q96LQ0 422 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 MUC3BQ9H195 1237 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 BHMT2Q9H2M3 363 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 RAVER2Q9HCJ3 691 aaKnown RBP9.4□□□□□ -0.91
CTNND1-201ENST00000358694 RPRD1BQ9NQG5 326 aaKnown RBP9.4□□□□□ -0.91
CTNND1-201ENST00000358694 LATS2Q9NRM7 1088 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-201ENST00000358694 KDM5BQ9UGL1 1544 aa9.4□□□□□ -0.91
CTNND1-201ENST00000358694 HMBSP08397 361 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 CDH2P19022 906 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 RFX3P48380 749 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PWP1Q13610 501 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 C6orf10Q5SRN2 563 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 SNRNP48Q6IEG0 339 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 FAM117BQ6P1L5 589 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 TTLL6Q8N841 843 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 RMDN3Q96TC7 470 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 RNF26Q9BY78 433 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 KIAA1586Q9HCI6 787 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PKP3Q9Y446 797 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PODXLO00592 558 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PRRG1O14668 218 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 TRAPPC3O43617 180 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 CYTH3O43739 400 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 TADA2AO75478 443 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 HAUS5O94927 633 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 SEC24BO95487 1268 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 MLNP12872 115 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 TYK2P29597 1187 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PDIA3P30101 505 aaKnown RBP9.39□□□□□ -0.91
CTNND1-201ENST00000358694 RUNX1T1Q06455 604 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 UBE3CQ15386 1083 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 IRAK1BP1Q5VVH5 260 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 APOA5Q6Q788 366 aa9.39□□□□□ -0.91
CTNND1-201ENST00000358694 PIGOQ8TEQ8 1089 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms