RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 ATP2A2P16615 1042 aaKnown RBP26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 ABCD1P33897 745 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 AFMP43652 599 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 DEFB103AP81534 67 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 KANK3Q6NY19 840 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 CCDC65Q8IXS2 484 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 CCDC51Q96ER9 411 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 CCDC34Q96HJ3 373 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 PANK4Q9NVE7 773 aa26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 RNF216Q9NWF9 866 aaPredicted RBP26.76■■□□□ 1.87
ALKAL1-201ENST00000358543 C9IYK1 514 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 PRPF40AO75400 957 aaKnown RBP26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 PRKCBP05771 671 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 IDEP14735 1019 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 SARSP49591 514 aaKnown RBP26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 HAUS6Q7Z4H7 955 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 FAM178BQ8IXR5 827 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 CRIPAKQ8N1N5 446 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 TIGD1Q96MW7 591 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 ST6GALNAC4Q9H4F1 302 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 OLFML3Q9NRN5 406 aa26.75■■□□□ 1.87
ALKAL1-201ENST00000358543 A0A0U1RQF3 1178 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 A0A1B0GUA9 196 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 PVALEFA0A1B0GWK0 134 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 ARF4P18085 180 aaPredicted RBP26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 ASIC1P78348 528 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 PRPF4BQ13523 1007 aaKnown RBP26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 CUL4BQ13620 913 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 HERC4Q5GLZ8 1057 aaPredicted RBP26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 NOTUMQ6P988 496 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 TAS1R3Q7RTX0 852 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 SFR1Q86XK3 245 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 MYOCDQ8IZQ8 938 aa26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 ELAC1Q9H777 363 aaKnown RBP26.74■■□□□ 1.87
ALKAL1-201ENST00000358543 CNTNAP2Q9UHC6 1331 aa26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 GTPBP6O43824 516 aaPredicted RBP26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 GTF2BQ00403 316 aa26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 TWF2Q6IBS0 349 aaKnown RBP26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 UNC13DQ70J99 1090 aa26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 ZNF720Q7Z2F6 126 aa26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 HERC6Q8IVU3 1022 aa26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 BLZF1Q9H2G9 400 aa26.73■■□□□ 1.87
ALKAL1-201ENST00000358543 B4GALT5O43286 388 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 ZNF623O75123 536 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 GJB5O95377 273 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 SKIP12755 728 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 RAB27AP51159 221 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 SMAD3P84022 425 aaKnown RBP26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 STRN3Q13033 797 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 NPAS4Q8IUM7 802 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 ELOA2Q8IYF1 753 aaPredicted RBP26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 GRAMD1CQ8IYS0 662 aa26.72■■□□□ 1.87
ALKAL1-201ENST00000358543 K7ENM7 598 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 NR1I2O75469 434 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 STAG3L1P0CL83 205 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 LIG1P18858 919 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 NMT1P30419 496 aaKnown RBP26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 COASYQ13057 564 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 CPB2Q96IY4 423 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 STRA6Q9BX79 667 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 MRPL4Q9BYD3 311 aaKnown RBP26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 MRPL44Q9H9J2 332 aaKnown RBP26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 PCDHB7Q9Y5E2 793 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 LAMA3Q16787 3333 aa26.71■■□□□ 1.87
ALKAL1-201ENST00000358543 EOMESO95936 686 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 EDN1P05305 212 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 CASP1P29466 404 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 EHHADHQ08426 723 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 UBXN11Q5T124 520 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 NT5DC1Q5TFE4 455 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 FAM109BQ6ICB4 259 aaPredicted RBP26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 ECHDC2Q86YB7 292 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 FAM105AQ9NUU6 356 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 TMEM161AQ9NX61 479 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 TBX20Q9UMR3 447 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 PTPRSQ13332 1948 aa26.7■■□□□ 1.86
ALKAL1-201ENST00000358543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 TTLL13PA6NNM8 815 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 N4BP3O15049 544 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 PPP1R37O75864 691 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 DPYDQ12882 1025 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 ALCAMQ13740 583 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 SLC27A1Q6PCB7 646 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 ZNF598Q86UK7 904 aaKnown RBP26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 HVCN1Q96D96 273 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 RAD9AQ99638 391 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 ACO2Q99798 780 aaKnown RBP26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 LMBRD1Q9NUN5 540 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 TNFSF13BQ9Y275 285 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 PCDHB2Q9Y5E7 798 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 PCDHA11Q9Y5I1 949 aa26.69■■□□□ 1.86
ALKAL1-201ENST00000358543 GRXCR1A8MXD5 290 aa26.68■■□□□ 1.86
ALKAL1-201ENST00000358543 GOLGA6L22H0YM25 854 aa26.68■■□□□ 1.86
ALKAL1-201ENST00000358543 KLRC4O43908 158 aa26.68■■□□□ 1.86
ALKAL1-201ENST00000358543 UPP2O95045 317 aa26.68■■□□□ 1.86
ALKAL1-201ENST00000358543 HTRA4P83105 476 aaPredicted RBP26.68■■□□□ 1.86
ALKAL1-201ENST00000358543 HABP4Q5JVS0 413 aaKnown RBP26.68■■□□□ 1.86
ALKAL1-201ENST00000358543 ATF7IP2Q5U623 682 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms