RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZFPM1Q8IX07 1006 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 CCDC65Q8IXS2 484 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 IFT20Q8IY31 132 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 GRAMD1CQ8IYS0 662 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 GATA6Q92908 595 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF333Q96JL9 665 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 PBKQ96KB5 322 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 PFDN4Q9NQP4 134 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 KIAA1522Q9P206 1035 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ATRNL1Q5VV63 1379 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 FAM237AA0A1B0GTK4 181 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 SH2B2O14492 632 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZBTB43O43298 467 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 TJP3O95049 919 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 PDGFRBP09619 1106 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 NAT2P11245 290 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 STIP1P31948 543 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 CCT6AP40227 531 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 USP11P51784 963 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF157P51786 506 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 HPCAP84074 193 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ITGA7Q13683 1181 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 RCN2Q14257 317 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 SLC44A4Q53GD3 710 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 THOC7Q6I9Y2 204 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 WDR59Q6PJI9 974 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 CACNA2D4Q7Z3S7 1137 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 TRIML1Q8N9V2 468 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 IGDCC4Q8TDY8 1250 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 PPP2R3CQ969Q6 453 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 WNK4Q96J92 1243 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 RAB17Q9H0T7 212 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 TMED5Q9Y3A6 229 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 MYH10P35580 1976 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 CLRN2A0PK11 232 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 SUPT20HL1Q3ZLR7 823 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 CDKAL1Q5VV42 579 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 SLC2A7Q6PXP3 512 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 HHIPL2Q6UWX4 724 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 LRIG3Q6UXM1 1119 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 NME8Q8N427 588 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 FERMT2Q96AC1 680 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 PURBQ96QR8 312 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 POLR3CQ9BUI4 534 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 DDX23Q9BUQ8 820 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 NMRK1Q9NWW6 199 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 CYP39A1Q9NYL5 469 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF112Q9UJU3 913 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 KCNJ14Q9UNX9 436 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 DAGLAQ9Y4D2 1042 aa10.03□□□□□ -0.8
SMARCAL1-202ENST00000358207 GOLGA6L10A0A0M3HER8 536 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 E7ENQ6 273 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 H0Y3Z8 333 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 ATP9AO75110 1047 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 COBLO75128 1261 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 GNRH1P01148 92 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 GOLGA8HP0CJ92 632 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 GBP1P32455 592 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 PSMD7P51665 324 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF131P52739 623 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 NLRP5P59047 1200 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 TFAP4Q01664 338 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 RESP18Q5W5W9 173 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 FBXO46Q6PJ61 603 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 FAM47EQ6ZV65 393 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 DAAM2Q86T65 1068 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 ARMC5Q96C12 935 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 DDX4Q9NQI0 724 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 CAPN6Q9Y6Q1 641 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 MYH7BA7E2Y1 1941 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 MYCLP1P12525 358 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 RASA1P20936 1047 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 BIRC3Q13489 604 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 KCTD19Q17RG1 926 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 SYDE2Q5VT97 1194 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 ENAHQ8N8S7 591 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 ATXN2LQ8WWM7 1075 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 MS4A14Q96JA4 679 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 DUSP9Q99956 384 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 SUCLA2Q9P2R7 463 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 HESX1Q9UBX0 185 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 COMMD3-BMI1R4GMX3 469 aa10.02□□□□□ -0.81
SMARCAL1-202ENST00000358207 MMEP08473 750 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 GNAT2P19087 354 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 KCNA4P22459 653 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 PRMT2P55345 433 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 DAB2IPQ5VWQ8 1189 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 KLHL10Q6JEL2 608 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms