RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MAPK8IP1Q9UQF2 711 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 H3BQF6 201 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 TMEM253P0C7T8 217 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 TKTP29401 623 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 UIMC1Q96RL1 719 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 DIABLOQ9NR28 239 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 KRT7P08729 469 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 FAM133BQ5BKY9 247 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 BHMTQ93088 406 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 MRPL11Q9Y3B7 192 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF12P17014 697 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 GARSP41250 739 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 CARSP49589 748 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 PPIL2Q13356 520 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 C16orf89Q6UX73 402 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 TGS1Q96RS0 853 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 RNF216Q9NWF9 866 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 ZCCHC11Q5TAX3 1644 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 STMN1P16949 149 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 ERVK-24P63145 666 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 ARHGEF1Q92888 912 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 YTHDF1Q9BYJ9 559 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 PARVBQ9HBI1 364 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 GOLGA8IPA6NC78 632 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 DRD4P21917 467 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 CSNK2BP67870 215 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 DSG1Q02413 1049 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 MTHFD1LQ6UB35 978 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 PCDHB6Q9Y5E3 794 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 GOLGA8JA6NMD2 632 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 IGF2BP3O00425 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 PSTPIP1O43586 416 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 ZC3H11AO75152 810 aaKnown RBP eCLIP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 HSPA1AP0DMV8 641 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 HSPA1BP0DMV9 641 aaKnown RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 BNIP1Q12981 228 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 CHST3Q7LGC8 479 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-204ENST00000358025 SLCO2A1Q92959 643 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 EMILIN3Q9NT22 766 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 ZFP69BQ9UJL9 534 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 MYH6P13533 1939 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 PSEN1P49768 467 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 HERVK_113P62684 666 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 KCNH2Q12809 1159 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 TCEAL1Q15170 157 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 DCUN1D2Q6PH85 259 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 C6orf89Q6UWU4 347 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 TOM1L2Q6ZVM7 507 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 BEST2Q8NFU1 509 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 MMS19Q96T76 1030 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 BTBD7Q9P203 1132 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 CDY2AQ9Y6F7 541 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 CDY1Q9Y6F8 540 aa4.38□□□□□ -1.71
SYNE2-204ENST00000358025 JCADQ9P266 1359 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TEX33O43247 280 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 FDPSP14324 419 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MX2P20592 715 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 HSPA1LP34931 641 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 HSP90AA4PQ58FG1 418 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 LRRC38Q5VT99 294 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 EGFL6Q8IUX8 553 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SCG3Q8WXD2 468 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 LGR6Q9HBX8 967 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 GID8Q9NWU2 228 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 POLGP54098 1239 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 NR5A1Q13285 461 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 GRM4Q14833 912 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PCYOX1LQ8NBM8 494 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TNIP2Q8NFZ5 429 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 RASSF5Q8WWW0 418 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CDHR1Q96JP9 859 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF317Q96PQ6 595 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 NACA2Q9H009 215 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MAP3K20Q9NYL2 800 aaKnown RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PSMC3IPQ9P2W1 217 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SAC3D1A6NKF1 404 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CAPN9O14815 690 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CSF1RP07333 972 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 KAZNQ674X7 775 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 SETDB2Q96T68 719 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PLK2Q9NYY3 685 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PKD2L2Q9NZM6 624 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 VPS54Q9P1Q0 977 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ATXN10Q9UBB4 475 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 GRID1Q9ULK0 1009 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 FGGP02679 453 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 C4BPBP20851 252 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 FOXO4P98177 505 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 C11orf63Q6NUN7 778 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 HDAC7Q8WUI4 952 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 MAGED4Q96JG8 741 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 ISCA1Q9BUE6 129 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CHN1P15882 459 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 CDC27P30260 824 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 RPS6KA3P51812 740 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 PIGWQ7Z7B1 504 aa4.37□□□□□ -1.71
SYNE2-204ENST00000358025 TMPRSS6Q8IU80 811 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms