RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ARIH2O95376 493 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 FGFR1OPO95684 399 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 RPA1P27694 616 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 CARSP49589 748 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 SKIDA1Q1XH10 827 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 CFAP58Q5T655 872 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 WHAMMQ8TF30 809 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 DNAH12Q6ZR08 3092 aa13.77□□□□□ -0.2
RTFDC1-202ENST00000357348 TNPO2O14787 897 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 PPP1R37O75864 691 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 CXCR5P32302 372 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 LRRC63Q05C16 580 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 PTGISQ16647 500 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 TMEM119Q4V9L6 283 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 GJC2Q5T442 439 aaPredicted RBP13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 NAA35Q5VZE5 725 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 MICALCLQ6ZW33 695 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 UNC13DQ70J99 1090 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 RPAINQ86UA6 219 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 RAD54LQ92698 747 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 COPS5Q92905 334 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 MPHOSPH6Q99547 160 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 LXNQ9BS40 222 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 MGAMO43451 1857 aa13.77□□□□□ -0.21
RTFDC1-202ENST00000357348 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 TMEM150BA6NC51 233 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 HMGB1P1B2RPK0 211 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 CES2O00748 559 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 STAM2O75886 525 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 KRT14P02533 472 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 FAM153BP0C7A2 387 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 HSPA9P38646 679 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 MRPS25P82663 173 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 CCL14Q16627 93 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 FAM153CQ494X1 144 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 TTC19Q6DKK2 380 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 SV2BQ7L1I2 683 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 SH2D3CQ8N5H7 860 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 MAML3Q96JK9 1138 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 ATP6V1G3Q96LB4 118 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 HSD17B14Q9BPX1 270 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 NT5C3AQ9H0P0 336 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 NUCKS1Q9H1E3 243 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 JPH1Q9HDC5 661 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 FAM153AQ9UHL3 310 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 TMEM59LQ9UK28 342 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 PCDHGC5Q9Y5F6 944 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 MAFGO15525 162 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 HEXIM1O94992 359 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 EHHADHQ08426 723 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 UGCGQ16739 394 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 PRAMEF19Q5SWL8 479 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 C6orf89Q6UWU4 347 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 LRIG3Q6UXM1 1119 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 OTUD6BQ8N6M0 293 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 ZNF473Q8WTR7 871 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 CDHR1Q96JP9 859 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 CABS1Q96KC9 395 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 MAF1Q9H063 256 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 BHMT2Q9H2M3 363 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 SLC9A2Q9UBY0 812 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 NFU1Q9UMS0 254 aa13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 MYH9P35579 1960 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-202ENST00000357348 MYMKA6NI61 221 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 ASB14A6NK59 587 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 KIAA0754O94854 1291 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 GGPS1O95749 300 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 PLA2G4BP0C869 781 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 NR1D1P20393 614 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 MDH1P40925 334 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 CAP1Q01518 475 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 KCNMA1Q12791 1236 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 EPHA7Q15375 998 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 NAB2Q15742 525 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 MEI1Q5TIA1 1274 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 ABRAQ8N0Z2 381 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 CASKIN2Q8WXE0 1202 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 MS4A14Q96JA4 679 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 RABEP2Q9H5N1 569 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 EPB41L5Q9HCM4 733 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 FLRT1Q9NZU1 646 aa13.75□□□□□ -0.21
RTFDC1-202ENST00000357348 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms