RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 SHROOM1Q2M3G4 852 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 QRICH1Q2TAL8 776 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 TBC1D10BQ4KMP7 808 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 DNAJC14Q6Y2X3 702 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 PPP4R3CPQ6ZMV5 832 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 APLFQ8IW19 511 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCDC105Q8IYK2 499 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM186BQ8IYM0 893 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ANKRD42Q8N9B4 389 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ATL2Q8NHH9 583 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ERMNQ8TAM6 284 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CYP2W1Q8TAV3 490 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 LNX1Q8TBB1 728 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ERP44Q9BS26 406 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 MXD3Q9BW11 206 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 KCNK9Q9NPC2 374 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CFAP73A6NFT4 308 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 FOXO6A8MYZ6 492 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ACSL3O95573 720 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 TM4SF1P30408 202 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 HOXD13P35453 343 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CD151P48509 253 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CACNB3P54284 484 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 RHBDL3P58872 404 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 BYSLQ13895 437 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ANKRD20A2Q5SQ80 823 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ANKRD20A1Q5TYW2 823 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 DCAF12L1Q5VU92 463 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ANKRD20A3Q5VUR7 823 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 AMIGO3Q86WK7 504 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 JAMLQ86YT9 394 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 KIAA0825Q8IV33 1275 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ALG3Q92685 438 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 BICD1Q96G01 975 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 RUSC1Q9BVN2 902 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 MAF1Q9H063 256 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 SERPINB13Q9UIV8 391 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCT8L1PA6NM43 557 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCDC169A6NNP5 214 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 hCG_1984214I3L0E3 225 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ALDH3A1P30838 453 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 MARCKSL1P49006 195 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 MARSP56192 900 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 UBXN2AP68543 259 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ARHGAP4P98171 946 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 DYNC1I2Q13409 638 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 KIAA1755Q5JYT7 1200 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRIM68Q6AZZ1 485 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 KIF2BQ8N4N8 673 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZNF713Q8N859 430 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CNBD1Q8NA66 436 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 RFFLQ8WZ73 363 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 NAF1Q96HR8 494 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 HES6Q96HZ4 224 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM129AQ9BZQ8 928 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CNOT10Q9H9A5 744 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 PIDD1Q9HB75 910 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 DNAAF2Q9NVR5 837 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 NARFQ9UHQ1 456 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CES2O00748 559 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 NPTXRO95502 500 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 GSTA1P08263 222 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 SOX5P35711 763 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 VPS41P49754 854 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 EIF3BP55884 814 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 POLE2P56282 527 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 GRAPQ13588 217 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZNF268Q14587 947 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ERMARDQ5T6L9 678 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ILDR2Q71H61 639 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 SYCP3Q8IZU3 236 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 C1orf131Q8NDD1 294 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 GDAP1Q8TB36 358 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 GRAPLQ8TC17 118 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ATP8B4Q8TF62 1192 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 KRT35Q92764 455 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 RBM17Q96I25 401 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 PABPC3Q9H361 631 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 METTL14Q9HCE5 456 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ABCF3Q9NUQ8 709 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 TYW1Q9NV66 732 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 WDR35Q9P2L0 1181 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 RASAL2Q9UJF2 1139 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 GGA1Q9UJY5 639 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 RABGAP1Q9Y3P9 1069 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 MYH1P12882 1939 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 C5orf60A6NFR6 353 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ATP6V1G1O75348 118 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 POLD1P28340 1107 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 SMARCA1P28370 1054 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 SFSWAPQ12872 951 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRIP13Q15645 432 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 LONRF1Q17RB8 773 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 CBWD6Q4V339 395 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 CBWD3Q5JTY5 395 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms