RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PFDN4Q9NQP4 134 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TXNDC16Q9P2K2 825 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ANAPC5Q9UJX4 755 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 WDR37Q9Y2I8 494 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 GLI1P08151 1106 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 UBTFL6P0CB48 400 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 GFPT1Q06210 699 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF268Q14587 947 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 OTUD6AQ7L8S5 288 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 CD209Q9NNX6 404 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 DNM3Q9UQ16 869 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 F8VZ95 297 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 MTFR1Q15390 333 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ASPRV1Q53RT3 343 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 SGO2Q562F6 1265 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ERICH1Q86X53 443 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 SH3GLB1Q9Y371 365 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 LAMB1P07942 1786 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TMEM110-MUSTN1A8MSY1 372 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 RASA4BC9J798 803 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 RASA4O43374 803 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ESRRAP11474 423 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 FDPSP14324 419 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 CDC25CP30307 473 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 MAPK7Q13164 816 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 STOX1Q6ZVD7 989 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TMEM126BQ8IUX1 230 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 CMTM5Q96DZ9 223 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 MTRQ99707 1265 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 IFT122Q9HBG6 1241 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 RAB20Q9NX57 234 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 UTP6Q9NYH9 597 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 TRMT112Q9UI30 125 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 CYP7A1P22680 504 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ADAM9Q13443 819 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 U2AF1L4Q8WU68 220 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 CEP95Q96GE4 821 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 KCNK16Q96T55 309 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 VPS37BQ9H9H4 285 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TMOD2Q9NZR1 351 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 STARD13Q9Y3M8 1113 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 EME2A4GXA9 379 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 TPD52L2O43399 206 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 UNC5CO95185 931 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 DRD4P21917 467 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 EZH2Q15910 746 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 OLFML1Q6UWY5 402 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7□□□□□ -1.29
TRIM38-201ENST00000357085 IL17REQ8NFR9 667 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 WDR35Q9P2L0 1181 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 BLOC1S6Q9UL45 172 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 CTDP1Q9Y5B0 961 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 PEAK1Q9H792 1746 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TBC1D12O60347 775 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 RTN2O75298 545 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 PDE5AO76074 875 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TSHRP16473 764 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ACAT1P24752 427 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 POLGP54098 1239 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 PTENP60484 403 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TAP1Q03518 808 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 RCN1Q15293 331 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ZCWPW2Q504Y3 356 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 CDKL2Q92772 493 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 EPAS1Q99814 870 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 TRIM9Q9C026 710 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 EHD2Q9NZN4 543 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 DNM1LO00429 736 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 LSM1O15116 133 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TCEA3O75764 348 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 NR2F2P24468 414 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PTDSS1P48651 473 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PHF20Q9BVI0 1012 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 DDX47Q9H0S4 455 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PLK2Q9NYY3 685 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 NEDD4P46934 1319 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 FRMPD4Q14CM0 1322 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 KLHL2O95198 593 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TFAP4Q01664 338 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 SMARCAL1Q9NZC9 954 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TOGARAM1Q9Y4F4 1720 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PDXKO00764 312 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PSTPIP1O43586 416 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 ATP9AO75110 1047 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 KCNA4P22459 653 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 NSFP46459 744 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MAPRE2Q15555 327 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MEI1Q5TIA1 1274 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 KRT80Q6KB66 452 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 CRLF3Q8IUI8 442 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MDM1Q8TC05 714 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 DDX25Q9UHL0 483 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 ATAD5Q96QE3 1844 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 NCANO14594 1321 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TNFAIP8O95379 198 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PENKP01210 267 aaPredicted RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 POLR2EP19388 210 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 R3HDM1Q15032 1099 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 C1orf146Q5VVC0 180 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MARK2Q7KZI7 788 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms