RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 MAPK6Q16659 721 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF568Q3ZCX4 644 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 FASTKD1Q53R41 847 aaKnown RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 EFHC2Q5JST6 749 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 FAM213AQ9BRX8 229 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 NT5C2P49902 561 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 GRIN1Q05586 938 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 NFRKBQ6P4R8 1299 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 NDFIP2Q9NV92 336 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 KDM5DQ9BY66 1539 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 H0Y626 953 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 NCK2O43639 380 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 TRIM16O95361 564 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 GGPS1O95749 300 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 NNMTP40261 264 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 PRAMEP78395 509 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 MRPS15P82914 257 aaKnown RBP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 DDX42Q86XP3 938 aaKnown RBP eCLIP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 ABHD8Q96I13 439 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 BPIFA3Q9BQP9 254 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 SLFNL1Q499Z3 407 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 ARL8AQ96BM9 186 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 PCSK1NQ9UHG2 260 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 POTEB3A0JP26 581 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 GNA15P30679 374 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 COASYQ13057 564 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 LRRC14Q15048 493 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 POTEBQ6S5H4 581 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 PADI6Q6TGC4 694 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 PBXIP1Q96AQ6 731 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 ASIC4Q96FT7 647 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 hCG_2014768A0A024R1R8 64 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 UBA6A0AVT1 1052 aaPredicted RBP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 KCNH2Q12809 1159 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 INPP5AQ14642 412 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 ARID5BQ14865 1188 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF555Q8NEP9 628 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 AFG1LQ8WV93 481 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 GFM2Q969S9 779 aaKnown RBP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 TSR3Q9UJK0 312 aaKnown RBP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 PCDHGB4Q9UN71 923 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 HIC1Q14526 733 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 DCAF4L1Q3SXM0 396 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 TJAP1Q5JTD0 557 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 LRRC8BQ6P9F7 803 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 PI16Q6UXB8 463 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 ANKS3Q6ZW76 656 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 RNF135Q8IUD6 432 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 STAMBPL1Q96FJ0 436 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 PIH1D3Q9NQM4 214 aaKnown RBP15.78■□□□□ 0.12
LMX1B-201ENST00000355497 EHD2Q9NZN4 543 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 BFARQ9NZS9 450 aa15.78■□□□□ 0.12
LMX1B-201ENST00000355497 DEAF1O75398 565 aaPredicted RBP15.77■□□□□ 0.12
LMX1B-201ENST00000355497 GFAPP14136 432 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 NFX1Q12986 1120 aaKnown RBP15.77■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF341Q9BYN7 854 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 ATP11BQ9Y2G3 1177 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF263O14978 683 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 VAMP7P51809 220 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 DMC1Q14565 340 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 TMEM179Q6ZVK1 233 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.12
LMX1B-201ENST00000355497 TEX9Q8N6V9 391 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 WWP1Q9H0M0 922 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF711Q9Y462 761 aa15.77■□□□□ 0.12
LMX1B-201ENST00000355497 DPYSL4O14531 572 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 ZNF189O75820 626 aaPredicted RBP15.77■□□□□ 0.11
LMX1B-201ENST00000355497 TYK2P29597 1187 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 ANO4Q32M45 955 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 ADCK1Q86TW2 530 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 PKD2L2Q9NZM6 624 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 SLC16A4O15374 487 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 SEC24DO94855 1032 aaPredicted RBP15.77■□□□□ 0.11
LMX1B-201ENST00000355497 STXBP2Q15833 593 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 TEX2Q8IWB9 1127 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 RHOT1Q8IXI2 618 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 URGCPQ8TCY9 931 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 OTULINQ96BN8 352 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 ADNPQ9H2P0 1102 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 ZSCAN32Q9NX65 697 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 PNMA3Q9UL41 463 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 AURKCQ9UQB9 309 aa15.77■□□□□ 0.11
LMX1B-201ENST00000355497 WDR47O94967 919 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 HSPA1AP0DMV8 641 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 HSPA1BP0DMV9 641 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 HSPA9P38646 679 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 IZUMO3Q5VZ72 239 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 CAPRIN2Q6IMN6 1127 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 CCDC137Q6PK04 289 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 RFX8Q6ZV50 586 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 ARHGEF1Q92888 912 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 SLC9A2Q9UBY0 812 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 CFAP43Q8NDM7 1665 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 EIF4E1BA6NMX2 242 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 NME3Q13232 169 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms