RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 S100A5P33763 92 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 DSG1Q02413 1049 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 KYNUQ16719 465 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 SOX5P35711 763 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 DYNLL1P63167 89 aaKnown RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 DLGAP5Q15398 846 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 LRRC36Q1X8D7 754 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 NAALADL2Q58DX5 795 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 NAIF1Q69YI7 327 aaPredicted RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 CCNYL1Q8N7R7 359 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 NSL1Q96IY1 281 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 PSMC3IPQ9P2W1 217 aaPredicted RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 KCNA6P17658 529 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 SLC1A1P43005 524 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 SCTRP47872 440 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 ARL13BQ3SXY8 428 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 MIS18BP1Q6P0N0 1132 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 DDHD1Q8NEL9 900 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 DDX17Q92841 729 aaKnown RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 THTPAQ9BU02 230 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 KIAA1586Q9HCI6 787 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 TMEM120BA0PK00 339 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 C1orf54Q8WWF1 131 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 INTS2Q9H0H0 1204 aaKnown RBP13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 IFNA8P32881 189 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 TBCCQ15814 346 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 TRIM72Q6ZMU5 477 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 SFR1Q86XK3 245 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 XXYLT1Q8NBI6 393 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 TTC8Q8TAM2 541 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 SH3GL2Q99962 352 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 LRRC4Q9HBW1 653 aa13.48□□□□□ -0.25
SYNCRIP-201ENST00000355238 EIF4G3O43432 1585 aaKnown RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 AP3B2Q13367 1082 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 LONRF1Q17RB8 773 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 CDR2LQ86X02 465 aaPredicted RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 PLD3Q8IV08 490 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 TEX12Q9BXU0 123 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 OLFML3Q9NRN5 406 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 SLC13A4Q9UKG4 626 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 YEATS2Q9ULM3 1422 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 A0A1B0GW55 424 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 RAD51CO43502 376 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DUX4L2P0CJ85 424 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DUX4L3P0CJ86 424 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DUX4L4P0CJ87 422 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DUX4L5P0CJ88 424 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DUX4L6P0CJ89 424 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DUX4L7P0CJ90 424 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 PPARGP37231 505 aaPredicted RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 FXR1P51114 621 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■■■□ 19.8
SYNCRIP-201ENST00000355238 TMED8Q6PL24 325 aaPredicted RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 FRMD5Q7Z6J6 570 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 ZNF555Q8NEP9 628 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 STRBPQ96SI9 672 aaKnown RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 COG4Q9H9E3 785 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 PAPOLBQ9NRJ5 636 aaKnown RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DUX4Q9UBX2 424 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 FOXN1O15353 648 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 COL23A1Q86Y22 540 aaPredicted RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 OR2W6PQ8NHA6 318 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 ADNPQ9H2P0 1102 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 B2RBV5 119 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 SCP2P22307 547 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 KIRREL3Q8IZU9 778 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 EXT2Q93063 718 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 CDHR1Q96JP9 859 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 SLC12A6Q9UHW9 1150 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 CDHR2Q9BYE9 1310 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 GNAT1P11488 350 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 TYK2P29597 1187 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 ARSEP51690 589 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 ROR1Q01973 937 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 CAPRIN1Q14444 709 aaKnown RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 KCTD1Q719H9 257 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 ENOSF1Q7L5Y1 443 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 MAML3Q96JK9 1138 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 TRIM51Q9BSJ1 452 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 IGSF1Q8N6C5 1336 aa13.47□□□□□ -0.25
SYNCRIP-201ENST00000355238 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 GLYCTKQ8IVS8 523 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 SNRNP27Q8WVK2 155 aaKnown RBP13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 HEXIM2Q96MH2 286 aaKnown RBP13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
SYNCRIP-201ENST00000355238 NGRNQ9NPE2 291 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms