RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 JRKLQ9Y4A0 524 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 XPOTO43592 962 aaKnown RBP13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 ATP9AO75110 1047 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 FGRP09769 529 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 RBM43Q6ZSC3 357 aaKnown RBP13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 CYP26B1Q9NR63 512 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 TXNDC16Q9P2K2 825 aa13.28□□□□□ -0.28
PCDHB11-201ENST00000354757 PHRF1Q9P1Y6 1649 aaKnown RBP13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 OATP04181 439 aa13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 ARL1P40616 181 aaPredicted RBP13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 GLRA4Q5JXX5 417 aa13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 FRMD5Q7Z6J6 570 aa13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 NME8Q8N427 588 aa13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 COPS5Q92905 334 aa13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 GPRASP2Q96D09 838 aa13.27□□□□□ -0.28
PCDHB11-201ENST00000354757 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 ZNF286BP0CG31 522 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 HADHQ16836 314 aaKnown RBP13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 PDXDC1Q6P996 788 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 ZWILCHQ9H900 591 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 AGO4Q9HCK5 861 aaKnown RBP13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 PPANQ9NQ55 473 aaKnown RBP13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 A0A1W2PQC6 194 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 BUB1BO60566 1050 aaPredicted RBP13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 AKAP3O75969 853 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 NPTX2P47972 431 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 GTF2A2P52657 109 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 KIZQ2M2Z5 673 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 ERICH1Q86X53 443 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 PPM1EQ8WY54 764 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 MKRN1Q9UHC7 482 aaKnown RBP13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.29
PCDHB11-201ENST00000354757 ESYT3A0FGR9 886 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 VTNP04004 478 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 ITGB5P18084 799 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 RARRES1P49788 294 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 SNX16P57768 344 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 TUBB4BP68371 445 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 ADCY1Q08828 1119 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 RSAD2Q8WXG1 361 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 WDR18Q9BV38 432 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 TOPORSQ9NS56 1045 aaPredicted RBP13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 ERAP1Q9NZ08 941 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 MAFGO15525 162 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 EVI5O60447 810 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 FGGP02679 453 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 TUBBP07437 444 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 CYP2C9P11712 490 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 LIG3P49916 1009 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 TMEM132BQ14DG7 1078 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 KCTD16Q68DU8 428 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 KIAA1841Q6NSI8 718 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 AFAP1L1Q8TED9 768 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 GCOM2Q9BZD3 368 aaPredicted RBP13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 LRRC4Q9HBW1 653 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 ZFYVE28Q9HCC9 887 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 SMARCAL1Q9NZC9 954 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 WEE2P0C1S8 567 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 PLTPP55058 493 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 DUOXA2Q1HG44 320 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 PPP6R3Q5H9R7 873 aaPredicted RBP13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 TREML2Q5T2D2 321 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 GSPT2Q8IYD1 628 aaKnown RBP13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 KLRG1Q96E93 195 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 IKZF4Q9H2S9 585 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 VPS37BQ9H9H4 285 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 STIM2Q9P246 746 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 FAM169AQ9Y6X4 670 aa13.26□□□□□ -0.29
PCDHB11-201ENST00000354757 H7C0C1 242 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 ATP5OP48047 213 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 CASP5P51878 434 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 CTAGE3PQ8IX95 158 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 MIS12Q9H081 205 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 AGAP1Q9UPQ3 857 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 PHLPP2Q6ZVD8 1323 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 MYO9BQ13459 2157 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 ZNF185O15231 689 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 ATP1A1P05023 1023 aaKnown RBP13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 GNA15P30679 374 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 JAG1P78504 1218 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 TNFAIP2Q03169 654 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 ORC1Q13415 861 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 EDRF1Q3B7T1 1238 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
PCDHB11-201ENST00000354757 KIAA1586Q9HCI6 787 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms