RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 SMIM24O75264 130 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 RASSF9O75901 435 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 IGHA2P01877 340 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 FAM163BP0C2L3 166 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 GNAT1P11488 350 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 UBA1P22314 1058 aaKnown RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 YY1P25490 414 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 ERCC5P28715 1186 aaPredicted RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 QARSP47897 775 aaKnown RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 SEPT14Q6ZU15 432 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 ARMCX2Q7L311 632 aa10.97□□□□□ -0.65
SYNE1-203ENST00000354674 MSL3Q8N5Y2 521 aaKnown RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 ZNF473Q8WTR7 871 aaKnown RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 EZH1Q92800 747 aaPredicted RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 DBR1Q9UK59 544 aaKnown RBP10.97□□□□□ -0.65
SYNE1-203ENST00000354674 IGKV6D-21A0A0A0MT36 114 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 MAP3K13O43283 966 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 CAPN15O75808 1086 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 ALDH1A1P00352 501 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 HOXC6P09630 235 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 ARHGAP25P42331 645 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 MAGEA10P43363 369 aaPredicted RBP10.96□□□□□ -0.65
SYNE1-203ENST00000354674 ASIC1P78348 528 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 DEFB115Q30KQ5 88 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 MED15Q96RN5 788 aa10.96□□□□□ -0.65
SYNE1-203ENST00000354674 SAMSN1Q9NSI8 373 aaKnown RBP10.96□□□□□ -0.65
SYNE1-203ENST00000354674 FARP2O94887 1054 aaPredicted RBP10.96□□□□□ -0.66
SYNE1-203ENST00000354674 PSMC5P62195 406 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 TTMPQ5BVD1 217 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 C1orf186Q6ZWK4 172 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 GPBP1Q86WP2 473 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 MAML3Q96JK9 1138 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 NAPGQ99747 312 aaPredicted RBP10.96□□□□□ -0.66
SYNE1-203ENST00000354674 NUP58Q9BVL2 599 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 KCND2Q9NZV8 630 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 TELO2Q9Y4R8 837 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 SYNGAP1Q96PV0 1343 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 hCG_2014768A0A024R1R8 64 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 SHOX2O60902 331 aaPredicted RBP10.96□□□□□ -0.66
SYNE1-203ENST00000354674 STBD1O95210 358 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 ARIH2O95376 493 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 ACTR2P61160 394 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 MYL5Q02045 173 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 IRF5Q13568 498 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 GIT2Q14161 759 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 UGCGQ16739 394 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 TAPT1Q6NXT6 567 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 TLDC1Q6P9B6 456 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 CAPNS2Q96L46 248 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 SPAG5Q96R06 1193 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 CCT8L2Q96SF2 557 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 EPAS1Q99814 870 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 BHMT2Q9H2M3 363 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 RMI1Q9H9A7 625 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 VTA1Q9NP79 307 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 TCEAL9Q9UHQ7 104 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 TRPC6Q9Y210 931 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 PCDHA2Q9Y5H9 948 aa10.96□□□□□ -0.66
SYNE1-203ENST00000354674 THSD7BQ9C0I4 1608 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 ZBTB39O15060 712 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 ANP32DO95626 131 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 SNAI1O95863 264 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 PSAPP07602 524 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 LSP1P33241 339 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 RBL2Q08999 1139 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 RINT1Q6NUQ1 792 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 CYFIP1Q7L576 1253 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 ADSSL1Q8N142 457 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 NPLOC4Q8TAT6 608 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 ENOX1Q8TC92 643 aaKnown RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 PIGOQ8TEQ8 1089 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 CCDC97Q96F63 343 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 GJD2Q9UKL4 321 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 MGAMO43451 1857 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 IGSF9BQ9UPX0 1349 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 CBFA2T2O43439 604 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 STX10O60499 249 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 SUPT20HL2P0C7V6 817 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 MAP2K5Q13163 448 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 CELF3Q5SZQ8 465 aaKnown RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 SLC30A9Q6PML9 568 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 METTL7BQ6UX53 244 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 DYMQ7RTS9 669 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 KIAA1328Q86T90 577 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 TBC1D1Q86TI0 1168 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 FBXO16Q8IX29 292 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 SYCP3Q8IZU3 236 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 TSEN2Q8NCE0 465 aaKnown RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 RUSC1Q9BVN2 902 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 EXOC1Q9NV70 894 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-203ENST00000354674 MCM3APO60318 1980 aa10.95□□□□□ -0.66
SYNE1-203ENST00000354674 PES1O00541 588 aaKnown RBP10.94□□□□□ -0.66
SYNE1-203ENST00000354674 TPD52L2O43399 206 aaKnown RBP10.94□□□□□ -0.66
SYNE1-203ENST00000354674 AOC2O75106 756 aa10.94□□□□□ -0.66
SYNE1-203ENST00000354674 PDHA1P08559 390 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms