RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SOX10P56693 466 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 FKBP3Q00688 224 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 MAPK7Q13164 816 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 HERC4Q5GLZ8 1057 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ANO5Q75V66 913 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 MAEAQ7L5Y9 396 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 GPRC5AQ8NFJ5 357 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 PIK3R5Q8WYR1 880 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 MMP19Q99542 508 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 CEP72Q9P209 647 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 RNF14Q9UBS8 474 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 COL4A3BPQ9Y5P4 624 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 LOXHD1Q8IVV2 1947 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 FAM155AB1AL88 458 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SLC26A4O43511 780 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ERLIN2O94905 339 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SERPING1P05155 500 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 UBA1P22314 1058 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 QARSP47897 775 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 RARRES1P49788 294 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 RNASE9P60153 205 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ACTR2P61160 394 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 POLR2FP61218 127 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 PSMD2Q13200 908 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 NAB2Q15742 525 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 FAM26FQ5R3K3 315 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SFMBT2Q5VUG0 894 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SWSAP1Q6NVH7 229 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ABHD15Q6UXT9 468 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 NLRX1Q86UT6 975 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 NELFCDQ8IXH7 590 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 MYOCDQ8IZQ8 938 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 COPS5Q92905 334 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 KRT12Q99456 494 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 TSG101Q99816 390 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 CPA4Q9UI42 421 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ZSWIM8A7E2V4 1837 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 A0A087X0T9 212 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 BACH1O14867 736 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 FAM228BP0C875 321 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 NMT1P30419 496 aaKnown RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 ICAM3P32942 547 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 GUCY2FP51841 1108 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 ARID5AQ03989 594 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 SLC18A3Q16572 532 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 ZC2HC1CQ53FD0 456 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 GJC2Q5T442 439 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 FBXO16Q8IX29 292 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 SYN2Q92777 582 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 RNPC3Q96LT9 517 aaKnown RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 NACC1Q96RE7 527 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 PCYT2Q99447 389 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 PACSIN1Q9BY11 444 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 KCTD10Q9H3F6 313 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 GPRC5CQ9NQ84 441 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 GABBR1Q9UBS5 961 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 ADAMTS1Q9UHI8 967 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 PCDHGC5Q9Y5F6 944 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 GSTTP1A0A1W2PQM5 241 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 MAFGO15525 162 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 ZEB2O60315 1214 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 ADORA2AP29274 412 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 YWHABP31946 246 aaKnown RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 GUCY1A3Q02108 690 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 KCTD2Q14681 263 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 ENOX2Q16206 610 aaKnown RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 KIAA0753Q2KHM9 967 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 CCDC40Q4G0X9 1142 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 FOXR2Q6PJQ5 311 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 EPM2AIP1Q7L775 607 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 CASKIN2Q8WXE0 1202 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 SENP7Q9BQF6 1050 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 LSM14BQ9BX40 385 aaKnown RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 MROH8Q9H579 483 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 JPH1Q9HDC5 661 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-204ENST00000353317 MORF4L1Q9UBU8 362 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 SLC9A2Q9UBY0 812 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 SLC45A1Q9Y2W3 748 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 PCDHA10Q9Y5I2 948 aa9.34□□□□□ -0.91
TRIM55-204ENST00000353317 WDR64B1ANS9 1081 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 FARP2O94887 1054 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-204ENST00000353317 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
TRIM55-204ENST00000353317 GTF2A1P52655 376 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-204ENST00000353317 KRT76Q01546 638 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 PAK2Q13177 524 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 ZNF792Q3KQV3 632 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 ZNF746Q6NUN9 644 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-204ENST00000353317 PADI6Q6TGC4 694 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 MREGQ8N565 214 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRIM55-204ENST00000353317 NUCKS1Q9H1E3 243 aaKnown RBP9.33□□□□□ -0.92
TRIM55-204ENST00000353317 PNMA3Q9UL41 463 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 NFASCO94856 1347 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 ADGRA2Q96PE1 1338 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms