RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 TGFB2P61812 414 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 CFAP58Q5T655 872 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 MEI1Q5TIA1 1274 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 USP37Q86T82 979 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 BCAS4Q8TDM0 211 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 SLC20A1Q8WUM9 679 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 TRIM51Q9BSJ1 452 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 POLR3FQ9H1D9 316 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-201ENST00000351288 NEUROG2Q9H2A3 272 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 SPON1Q9HCB6 807 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 TUFT1Q9NNX1 390 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 PTPN22Q9Y2R2 807 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 NHSQ6T4R5 1651 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 IGLV3-22A0A075B6J6 115 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 PJA2O43164 708 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 CYP26A1O43174 497 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 GGPS1O95749 300 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 PTPRAP18433 802 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 MCM3P25205 808 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 FMO5P49326 533 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 PRKCEQ02156 737 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 HYIQ5T013 277 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 APOBEC3FQ8IUX4 373 aaKnown RBP11.23□□□□□ -0.61
SMPD4-201ENST00000351288 SLC10A4Q96EP9 437 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
SMPD4-201ENST00000351288 NUCKS1Q9H1E3 243 aaKnown RBP11.23□□□□□ -0.61
SMPD4-201ENST00000351288 HSPBP1Q9NZL4 362 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
SMPD4-201ENST00000351288 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 ITGB3BPQ13352 177 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 NNTQ13423 1086 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 TRPC3Q13507 836 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 PGM5Q15124 567 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 Q4G0T1 1027 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 CEP85LQ5SZL2 805 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 GJC2Q5T442 439 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 DPP9Q86TI2 863 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 CRYGNQ8WXF5 182 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 ARHGEF26Q96DR7 871 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 BTBD6Q96KE9 485 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 FAM49AQ9H0Q0 323 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 FEZ2Q9UHY8 353 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 TTI1O43156 1089 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 DAPK3O43293 454 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 PSMD10O75832 226 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 KIF4AO95239 1232 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 MYCP01106 439 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 PIK3CAP42336 1068 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 SEC24CP53992 1094 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 EPHB4P54760 987 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 ERVK-9P63128 1117 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 TUBB4BP68371 445 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 SNX1Q13596 522 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 ZNF662Q6ZS27 426 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 LNX1Q8TBB1 728 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 CWC15Q9P013 229 aaKnown RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 AMFRQ9UKV5 643 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 MYH11P35749 1972 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 RARRES1P49788 294 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 KRT76Q01546 638 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 TMEM62Q0P6H9 643 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 MIS18BP1Q6P0N0 1132 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 ZNF720Q7Z2F6 126 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 SRLQ86TD4 932 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 RHPN2Q8IUC4 686 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 IFT20Q8IY31 132 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 LMBR1Q8WVP7 490 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 VTI1AQ96AJ9 217 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 ZBTB10Q96DT7 871 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 INPP4AQ96PE3 977 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 POLR3CQ9BUI4 534 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 RANBP17Q9H2T7 1088 aaKnown RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 A1CFQ9NQ94 594 aaKnown RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 C1orf112Q9NSG2 853 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 DNAJC17Q9NVM6 304 aaKnown RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 AIPL1Q9NZN9 384 aa11.22□□□□□ -0.61
SMPD4-201ENST00000351288 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
SMPD4-201ENST00000351288 CYP3A7-CYP3A51PA0A087WV96 503 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 ZNF233A6NK53 670 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 SART1O43290 800 aaKnown RBP11.21□□□□□ -0.61
SMPD4-201ENST00000351288 BUB1BO60566 1050 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-201ENST00000351288 FGGP02679 453 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 CYP3A7P24462 503 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 CTNNA2P26232 953 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 IRAK1P51617 712 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 MRPS9P82933 396 aaKnown RBP11.21□□□□□ -0.61
SMPD4-201ENST00000351288 EDRF1Q3B7T1 1238 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 USP38Q8NB14 1042 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 DHX38Q92620 1227 aaKnown RBP11.21□□□□□ -0.61
SMPD4-201ENST00000351288 ZNF653Q96CK0 615 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 NT5C1BQ96P26 610 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms