RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 GLRA2P23416 452 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 GTF2H1P32780 548 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SOX5P35711 763 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 STAT1P42224 750 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 NAMPTP43490 491 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 STAT5BP51692 787 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 GTF2A2P52657 109 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 DLG4P78352 724 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 PTK2Q05397 1052 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 GFPT1Q06210 699 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 ELF2Q15723 593 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 NAB2Q15742 525 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 ERCC6LQ2NKX8 1250 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 MTERF2Q49AM1 385 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 TDRD12Q587J7 1177 aaKnown RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 C10orf76Q5T2E6 689 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 FAM160B1Q5W0V3 765 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 MAP1SQ66K74 1059 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 GJB7Q6PEY0 223 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 PLPPR4Q7Z2D5 763 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 ZNF571Q7Z3V5 609 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SRGAP1Q7Z6B7 1085 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 CBWD2Q8IUF1 395 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 FMNL3Q8IVF7 1028 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 ABRAQ8N0Z2 381 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 CEP112Q8N8E3 955 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 ZSWIM2Q8NEG5 633 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 TRIM58Q8NG06 486 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SLC30A5Q8TAD4 765 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 ASAP3Q8TDY4 903 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 BRI3BPQ8WY22 251 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 RABGGTAQ92696 567 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SECISBP2LQ93073 1101 aaKnown RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 FAM167AQ96KS9 214 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SNX27Q96L92 541 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 IFT74Q96LB3 600 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SPAG5Q96R06 1193 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 GPR20Q99678 358 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 DEF6Q9H4E7 631 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 PCIF1Q9H4Z3 704 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 TMEM134Q9H6X4 195 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 NRBP2Q9NSY0 501 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 DNAJC12Q9UKB3 198 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 DIS3Q9Y2L1 958 aaKnown RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 EMSYQ7Z589 1322 aa7.52□□□□□ -1.2
TRIM55-203ENST00000350034 IGKV6-21A0A0C4DH24 114 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 ASB14A6NK59 587 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 ZBTB42B2RXF5 422 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 PDHXO00330 501 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 DDX3XO00571 662 aaKnown RBP eCLIP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 SORBS3O60504 671 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 TACC1O75410 805 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 MAFO75444 373 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 ATP1A1P05023 1023 aaKnown RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 CYP2C8P10632 490 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 TCF7P36402 384 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 GCLCP48506 637 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 POLGP54098 1239 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 TUBB4BP68371 445 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 CLDN10P78369 228 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 CCNA1P78396 465 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 CYP24A1Q07973 514 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 KIF22Q14807 665 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 DRAP1Q14919 205 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 SNRNP35Q16560 246 aaKnown RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 LY6KQ17RY6 165 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 TRMT1LQ7Z2T5 733 aaKnown RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 ZNF467Q7Z7K2 595 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 RDH13Q8NBN7 331 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 PARD3BQ8TEW8 1205 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 ATP8B4Q8TF62 1192 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 BBXQ8WY36 941 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 UBXN4Q92575 508 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 TMEM143Q96AN5 459 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 TMEM117Q9H0C3 514 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 EFCC1Q9HA90 598 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 MLXIPQ9HAP2 919 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 GBA2Q9HCG7 927 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 KIAA1586Q9HCI6 787 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 LUC7LQ9NQ29 371 aaKnown RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 APEX2Q9UBZ4 518 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 ADAMTS1Q9UHI8 967 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 NAGPAQ9UK23 515 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 INTUQ9ULD6 942 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 CAPN6Q9Y6Q1 641 aa7.52□□□□□ -1.21
TRIM55-203ENST00000350034 V9GYY5 206 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-203ENST00000350034 KIAA1217Q5T5P2 1943 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 CCL15-CCL14A0A0B4J2E2 113 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 MACROD2A1Z1Q3 448 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GOLGA8IPA6NC78 632 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GOLGA8JA6NMD2 632 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 LRRIQ3A6PVS8 624 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms