RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 ZNF18P17022 549 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 RASGRF1Q13972 1273 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 FAM153CQ494X1 144 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GJA10Q969M2 543 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 EYA1Q99502 592 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 NOL6Q9H6R4 1146 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 M0R3G1 203 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GGPS1O95749 300 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 SRGNP10124 158 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TMEM63BQ5T3F8 832 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TTC33Q6PID6 262 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 C1orf228Q6PIY5 440 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ACAD11Q709F0 780 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TERB1Q8NA31 727 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PRPF18Q99633 342 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 HEY2Q9UBP5 337 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 APPL1Q9UKG1 709 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PRELID1Q9Y255 219 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 AFG3L2Q9Y4W6 797 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GOLGA8RI6L899 631 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PHF2O75151 1096 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 RFC4P35249 363 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GALK1P51570 392 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GCKRQ14397 625 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GABPB2Q8TAK5 448 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PABPC3Q9H361 631 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ARHGEF35A5YM69 484 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 NPTXRO95502 500 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PRLRP16471 622 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 CIITAP33076 1130 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 USP46P62068 366 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 DYNLT1P63172 113 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GABPAQ06546 454 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 XRCC4Q13426 336 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 LVRNQ6Q4G3 990 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 DCUN1D5Q9BTE7 237 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PHACTR1Q9C0D0 580 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ZMYND8Q9ULU4 1186 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 CFAP99D6REC4 459 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TTLL1O95922 423 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 KRT7P08729 469 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 IFNAR1P17181 557 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 HERVK_113P62684 666 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 LRRC59Q96AG4 307 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
CDK5RAP2-201ENST00000349780 S100A5P33763 92 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ATXN3P54252 364 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 SERPINB12Q96P63 405 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 AIPL1Q9NZN9 384 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 FAM58BPP0C7Q3 252 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ZNF844Q08AG5 666 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 MTDHQ86UE4 582 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 JAMLQ86YT9 394 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ZNF786Q8N393 782 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 HBS1LQ9Y450 684 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 NPATQ14207 1427 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 SH3BP5O60239 455 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PIK3CAP42336 1068 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TRIM25Q14258 630 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 IZUMO3Q5VZ72 239 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 DCLK2Q8N568 766 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 MYLK2Q9H1R3 596 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 CYLDQ9NQC7 956 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 STK17AQ9UEE5 414 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TTC7AQ9ULT0 858 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 DUSP10Q9Y6W6 482 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 FKBP6O75344 327 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 SP100P23497 879 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 LBRQ14739 615 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TRIM60Q495X7 471 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 RSBN1Q5VWQ0 802 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 LRRC8EQ6NSJ5 796 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 RINLQ6ZS11 566 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 C1orf54Q8WWF1 131 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 DDX50Q9BQ39 737 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PLGRKTQ9HBL7 147 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 CARD8Q9Y2G2 431 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 KDM6BO15054 1643 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 A8MXQ7 604 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 ADCY6O43306 1168 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 STK4Q13043 487 aa12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP2-201ENST00000349780 POLA2Q14181 598 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms