RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 H0Y626 953 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 CYTH3O43739 400 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 TRIM16O95361 564 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 ENC1O14682 589 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 ECEL1O95672 775 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 TRIP4Q15650 581 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-201ENST00000347662 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
TRAF3-201ENST00000347662 HES6Q96HZ4 224 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 SP110Q9HB58 689 aa12.54□□□□□ -0.4
TRAF3-201ENST00000347662 PAIP2BQ9ULR5 123 aaKnown RBP12.54□□□□□ -0.4
TRAF3-201ENST00000347662 GPR1P46091 355 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 LRRC8EQ6NSJ5 796 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 ARMC6Q6NXE6 501 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 TUBGCP2Q9BSJ2 902 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-201ENST00000347662 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 CRB1P82279 1406 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 A0A0G2JND7 137 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 PFKFB2O60825 505 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 COPS2P61201 443 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 SYTL3Q4VX76 610 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 PRAMEF18Q5VWM3 479 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 VN1R5Q7Z5H4 357 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-201ENST00000347662 DPYDQ12882 1025 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 SEPT2Q15019 361 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 PLD3Q8IV08 490 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 TRIM33Q9UPN9 1127 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 CLIC2O15247 247 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 ASAP2O43150 1006 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 TOMM70O94826 608 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 TMPRSS15P98073 1019 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 DIS3LQ8TF46 1054 aaKnown RBP12.53□□□□□ -0.4
TRAF3-201ENST00000347662 TSC22D3Q99576 134 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 UBE2TQ9NPD8 197 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-201ENST00000347662 MAPK13O15264 365 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 PDHA1P08559 390 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 KCNA2P16389 499 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 ANKRD13CQ8N6S4 541 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 ZNF556Q9HAH1 456 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 FYNP06241 537 aa12.53□□□□□ -0.4
TRAF3-201ENST00000347662 RPRD1BQ9NQG5 326 aaKnown RBP12.53□□□□□ -0.4
TRAF3-201ENST00000347662 SHROOM1Q2M3G4 852 aaPredicted RBP12.52□□□□□ -0.4
TRAF3-201ENST00000347662 CCNYL1Q8N7R7 359 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 INPP5DQ92835 1189 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.4
TRAF3-201ENST00000347662 SYNMO15061 1565 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 IQCA1LA6NCM1 817 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 ZMYND10O75800 440 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 CA4P22748 312 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 FAM26FQ5R3K3 315 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 BZW1Q7L1Q6 419 aaKnown RBP12.52□□□□□ -0.4
TRAF3-201ENST00000347662 RASSF3Q86WH2 238 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 KRT78Q8N1N4 520 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.4
TRAF3-201ENST00000347662 CCT7Q99832 543 aa12.52□□□□□ -0.4
TRAF3-201ENST00000347662 ZC3H7BQ9UGR2 993 aaKnown RBP12.52□□□□□ -0.4
TRAF3-201ENST00000347662 ATP6V1C1P21283 382 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 PSMA2P25787 234 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 CXCR5P32302 372 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 SH3GL2Q99962 352 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 VPS11Q9H270 941 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 MRPL47Q9HD33 250 aaKnown RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 APOBEC2Q9Y235 224 aaKnown RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 MYO1GB0I1T2 1018 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 IYDQ6PHW0 289 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 APOBEC3FQ8IUX4 373 aaKnown RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 CDHR1Q96JP9 859 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 FRMD6Q96NE9 622 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 EPB41L5Q9HCM4 733 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 CNOT7Q9UIV1 285 aaKnown RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 SOX13Q9UN79 622 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 H7C1W4 665 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 ZNF197O14709 1029 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 VPS72Q15906 364 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 LRRC8BQ6P9F7 803 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 PCDHA4Q9UN74 947 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 TSPY1Q01534 308 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 LARP4BQ92615 738 aaKnown RBP12.52□□□□□ -0.41
TRAF3-201ENST00000347662 ZNF304Q9HCX3 659 aa12.52□□□□□ -0.41
TRAF3-201ENST00000347662 GYG2O15488 501 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 DARSP14868 501 aaKnown RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 MAP4K1Q92918 833 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 NGRNQ9NPE2 291 aaKnown RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 HEY1Q9Y5J3 304 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 CDK12Q9NYV4 1490 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 GOLGA8MH3BSY2 632 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 CTNND1O60716 968 aaKnown RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 ITGAXP20702 1163 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 PSMC2P35998 433 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms