RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 ATP9BO43861 1147 aa12.64□□□□□ -0.39
CACNA1C-204ENST00000347598 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-204ENST00000347598 SH3RF3Q8TEJ3 882 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-204ENST00000347598 COA1Q9GZY4 146 aa12.64□□□□□ -0.39
CACNA1C-204ENST00000347598 POLR3FQ9H1D9 316 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-204ENST00000347598 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-204ENST00000347598 C11orf74Q86VG3 221 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 RHOT2Q8IXI1 618 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 PPM1NQ8N819 430 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 OPTNQ96CV9 577 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 GNA15P30679 374 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 CHRNA3P32297 505 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 DIS3Q9Y2L1 958 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 H0YC42 278 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 PRRG1O14668 218 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 GUCY2CP25092 1073 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 EIF3BP55884 814 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 NCALDP61601 193 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 KLHL38Q2WGJ6 581 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 LCMT1Q9UIC8 334 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 APOA4P06727 396 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 IL6STP40189 918 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 UBE2Q2Q8WVN8 375 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 SASH1O94885 1247 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 NR5A1Q13285 461 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 PDAP1Q13442 181 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 GRAPQ13588 217 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 KIZQ2M2Z5 673 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 ZMYM1Q5SVZ6 1142 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 APOA5Q6Q788 366 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 FAM129AQ9BZQ8 928 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 PLAAQ9Y263 795 aa12.63□□□□□ -0.39
CACNA1C-204ENST00000347598 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 DEPDC1Q5TB30 811 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 TBC1D1Q86TI0 1168 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 VMP1Q96GC9 406 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 SPATA16Q9BXB7 569 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 YY1AP1Q9H869 796 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 GEMIN8Q9NWZ8 242 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 PODXLO00592 558 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 ECE2O60344 883 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 SUPT3HO75486 399 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 HIST1H2AGP0C0S8 130 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 NR1D1P20393 614 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 HIST1H2ADP20671 130 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 GCLMP48507 274 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 HIST1H2AHQ96KK5 128 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 HIST1H2AJQ99878 128 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 H2AFJQ9BTM1 129 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 IP6K2Q9UHH9 426 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 ARHGAP26Q9UNA1 814 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 EPB42P16452 691 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 CYFIP1Q7L576 1253 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 MCPH1Q8NEM0 835 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 HES6Q96HZ4 224 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 DMAP1Q9NPF5 467 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 SEC24DO94855 1032 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 TBL3Q12788 808 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 ARHGEF7Q14155 803 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 RINLQ6ZS11 566 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 SH3BP1Q9Y3L3 701 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 COPG1Q9Y678 874 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 PRPF3O43395 683 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 PHKG1Q16816 387 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 NDST4Q9H3R1 872 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 FAM96AQ9H5X1 160 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 TLR7Q9NYK1 1049 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 GABBR1Q9UBS5 961 aa12.62□□□□□ -0.39
CACNA1C-204ENST00000347598 SSH2Q76I76 1423 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 RNF123Q5XPI4 1314 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 APOL1O14791 398 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 PALMO75781 387 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 SOAT1P35610 550 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 PSMC5P62195 406 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 GPC5P78333 572 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 ARHGAP18Q8N392 663 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 ARL8AQ96BM9 186 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 MYCBPQ99417 103 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 SAMSN1Q9NSI8 373 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 NFU1Q9UMS0 254 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 MMP10P09238 476 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 GFAPP14136 432 aa12.61□□□□□ -0.39
CACNA1C-204ENST00000347598 LRRC63Q05C16 580 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms