RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 OR52E8Q6IFG1 317 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 ARHGEF18Q6ZSZ5 1173 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 FAM81AQ8TBF8 368 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 DTX3LQ8TDB6 740 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 COA7Q96BR5 231 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 DDX50Q9BQ39 737 aaKnown RBP16.47■□□□□ 0.23
LMNA-201ENST00000347559 A0A1W2PRG0 241 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 ABLIM1O14639 778 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 SPAG7O75391 227 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 PYGBP11216 843 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 TAC1P20366 129 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 RASA1P20936 1047 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 CASP4P49662 377 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 VPS41P49754 854 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 CACNA2D1P54289 1103 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 MARSP56192 900 aaKnown RBP16.46■□□□□ 0.23
LMNA-201ENST00000347559 PPATQ06203 517 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 DPY19L2P1Q6NXN4 242 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
LMNA-201ENST00000347559 MAGEB18Q96M61 343 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 PWWP2AQ96N64 755 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 GBP5Q96PP8 586 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 COG5Q9UP83 839 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
LMNA-201ENST00000347559 DIS3Q9Y2L1 958 aaKnown RBP16.46■□□□□ 0.23
LMNA-201ENST00000347559 PRDX5P30044 214 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 KHDC1Q4VXA5 237 aaKnown RBP16.46■□□□□ 0.23
LMNA-201ENST00000347559 RFWD3Q6PCD5 774 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 PALB2Q86YC2 1186 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 MAIP1Q8WWC4 291 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 SERPINB12Q96P63 405 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 UBE2OQ9C0C9 1292 aaKnown RBP16.46■□□□□ 0.23
LMNA-201ENST00000347559 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.46■□□□□ 0.237e-7■■□□□ 13.7
LMNA-201ENST00000347559 ASIC3Q9UHC3 531 aa16.46■□□□□ 0.23
LMNA-201ENST00000347559 MAPK13O15264 365 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 CHKAP35790 457 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 STRN3Q13033 797 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 MESDQ14696 234 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 ARHGAP44Q17R89 818 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 RBM26Q5T8P6 1007 aaKnown RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 RASIP1Q5U651 963 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 SNX30Q5VWJ9 437 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 IRGCQ6NXR0 463 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 NSUN4Q96CB9 384 aaKnown RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 ZNF333Q96JL9 665 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 STOML1Q9UBI4 398 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 INTUQ9ULD6 942 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 THAP12O43422 761 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 AKAP3O75969 853 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 ADAMTS2O95450 1211 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 TMEM253P0C7T8 217 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 PLA2G4BP0C869 781 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 UBTFL6P0CB48 400 aaPredicted RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 ERFP50548 548 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 MKRN3Q13064 507 aaKnown RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 UBE4AQ14139 1066 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 RCN1Q15293 331 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 EPHA7Q15375 998 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 TMEM119Q4V9L6 283 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 SEL1L2Q5TEA6 688 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 TRIM74Q86UV6 250 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 TRIM73Q86UV7 250 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 SLC7A6OSQ96CW6 309 aaPredicted RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 PASKQ96RG2 1323 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 POTEB3A0JP26 581 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 PALM3A6NDB9 673 aaPredicted RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 POTECB2RU33 542 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 ATP5HO75947 161 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 SKIP12755 728 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 POTEBQ6S5H4 581 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 UBL4BQ8N7F7 174 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 SCG3Q8WXD2 468 aaKnown RBP16.45■□□□□ 0.22
LMNA-201ENST00000347559 ART4Q93070 314 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 SIX2Q9NPC8 291 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 ATP8A2Q9NTI2 1148 aa16.45■□□□□ 0.22
LMNA-201ENST00000347559 VHLP40337 213 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 IL9RQ01113 521 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 PRUNE1Q86TP1 453 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 PIGBQ92521 554 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 DCLRE1BQ9H816 532 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 PHTF1Q9UMS5 762 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 NENFQ9UMX5 172 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 USH1CQ9Y6N9 552 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 PLCH1Q4KWH8 1693 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 FAM196BA6NMK8 535 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 ZCCHC18P0CG32 403 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 LMNB1P20700 586 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 DRAP1Q14919 205 aaPredicted RBP16.44■□□□□ 0.22
LMNA-201ENST00000347559 TRMT10CQ7L0Y3 403 aaKnown RBP16.44■□□□□ 0.22
LMNA-201ENST00000347559 ENDOVQ8N8Q3 282 aaKnown RBP16.44■□□□□ 0.22
LMNA-201ENST00000347559 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
LMNA-201ENST00000347559 ADAM33Q9BZ11 813 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 LRCH1Q9Y2L9 728 aa16.44■□□□□ 0.22
LMNA-201ENST00000347559 COL1A1P02452 1464 aaPredicted RBP16.43■□□□□ 0.22
LMNA-201ENST00000347559 LRRN2O75325 713 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 TTLL1O95922 423 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms