RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 UBL4BQ8N7F7 174 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 DYDC1Q8WWB3 177 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 RNF25Q96BH1 459 aaPredicted RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 XPO6Q96QU8 1125 aaKnown RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 POP1Q99575 1024 aaKnown RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 ELAC2Q9BQ52 826 aaKnown RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 LXNQ9BS40 222 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 INTUQ9ULD6 942 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 ANKRD62A6NC57 917 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 BCRP11274 1271 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 CBWD1Q9BRT8 395 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 CLRN2A0PK11 232 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 FOXO6A8MYZ6 492 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 POLR2MP0CAP2 368 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 RPL21P46778 160 aaKnown RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 PPATQ06203 517 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 FAM133BQ5BKY9 247 aaKnown RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 SEL1L2Q5TEA6 688 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 CCDC137Q6PK04 289 aaKnown RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 MKL1Q969V6 931 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 CHMP6Q96FZ7 201 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 PRMT1Q99873 361 aaKnown RBP15.72■□□□□ 0.11
SMTN-202ENST00000347557 GPR88Q9GZN0 384 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 UNC45AQ9H3U1 944 aa15.72■□□□□ 0.11
SMTN-202ENST00000347557 GTPBP10A4D1E9 387 aaKnown RBP15.71■□□□□ 0.11
SMTN-202ENST00000347557 SGPL1O95470 568 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 PRELPP51888 382 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 STAT2P52630 851 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 NPEPPSP55786 919 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 MAPK7Q13164 816 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 RRP1BQ14684 758 aaKnown RBP15.71■□□□□ 0.11
SMTN-202ENST00000347557 PPP1R7Q15435 360 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 DUPD1Q68J44 220 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 HVCN1Q96D96 273 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 CARD9Q9H257 536 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 INTS9Q9NV88 658 aaKnown RBP15.71■□□□□ 0.11
SMTN-202ENST00000347557 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.71■□□□□ 0.11
SMTN-202ENST00000347557 IGLV3-22A0A075B6J6 115 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 ACSL3O95573 720 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 CETN1Q12798 172 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 C11orf91Q3C1V1 193 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 FAM84AQ96KN4 292 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 NACC1Q96RE7 527 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 NENFQ9UMX5 172 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 SUGT1Q9Y2Z0 365 aa15.71■□□□□ 0.11
SMTN-202ENST00000347557 CYP26A1O43174 497 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 PPFIA2O75334 1257 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 PYGMP11217 842 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 POU5F1Q01860 360 aaKnown RBP15.7■□□□□ 0.1
SMTN-202ENST00000347557 PPP3CAQ08209 521 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 EMC10Q5UCC4 262 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 EIF1ADQ8N9N8 165 aaKnown RBP15.7■□□□□ 0.1
SMTN-202ENST00000347557 PABPC3Q9H361 631 aaKnown RBP15.7■□□□□ 0.1
SMTN-202ENST00000347557 FBXO28Q9NVF7 368 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 MTRF1LQ9UGC7 380 aaKnown RBP15.7■□□□□ 0.1
SMTN-202ENST00000347557 ANKRD63C9JTQ0 380 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 KIAA0391O15091 583 aaKnown RBP15.7■□□□□ 0.1
SMTN-202ENST00000347557 EIF3DO15371 548 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMTN-202ENST00000347557 TRIM37O94972 964 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 SSR1P43307 286 aaKnown RBP15.7■□□□□ 0.1
SMTN-202ENST00000347557 EPC2Q52LR7 807 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 ANKRD20A8PQ5CZ79 823 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 TTC27Q6P3X3 843 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 PADI6Q6TGC4 694 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 C6orf89Q6UWU4 347 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 PRELID2Q8N945 189 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 ANKRD42Q8N9B4 389 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 C1orf54Q8WWF1 131 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 MTFR1LQ9H019 292 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 HOMER2Q9NSB8 354 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 SCTRP47872 440 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 VAMP7P51809 220 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 LRRC34Q8IZ02 419 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 CCDC197Q8NCU1 140 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 C1orf131Q8NDD1 294 aaKnown RBP15.7■□□□□ 0.1
SMTN-202ENST00000347557 TATDN2Q93075 761 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 TBC1D31Q96DN5 1066 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 ZDHHC15Q96MV8 337 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMTN-202ENST00000347557 KCNK9Q9NPC2 374 aa15.7■□□□□ 0.1
SMTN-202ENST00000347557 CCDC169A6NNP5 214 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 PSMD10O75832 226 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 DLATP10515 647 aaKnown RBP15.69■□□□□ 0.1
SMTN-202ENST00000347557 ADRA2BP18089 450 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 DRD4P21917 467 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 CIITAP33076 1130 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 GPC5P78333 572 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 LONRF1Q17RB8 773 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 CEP55Q53EZ4 464 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 C2CD6Q53TS8 623 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 YTHDF3Q7Z739 585 aaKnown RBP15.69■□□□□ 0.1
SMTN-202ENST00000347557 PNMA8AQ86V59 439 aaPredicted RBP15.69■□□□□ 0.1
SMTN-202ENST00000347557 OLIG1Q8TAK6 271 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 FAM118BQ9BPY3 351 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 TUFT1Q9NNX1 390 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 ZDHHC18Q9NUE0 388 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 BAIAP2L1Q9UHR4 511 aa15.69■□□□□ 0.1
SMTN-202ENST00000347557 SCAF8Q9UPN6 1271 aaKnown RBP15.69■□□□□ 0.1
SMTN-202ENST00000347557 SMCHD1A6NHR9 2005 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms