RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 CPP00450 1065 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 SYT2Q8N9I0 419 aaPredicted RBP16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 GMCL1Q96IK5 515 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 AGPAT1Q99943 283 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 GCOM2Q9BZD3 368 aaPredicted RBP16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 CYP11B2P19099 503 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 RASSF2P50749 326 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 IL9RQ01113 521 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 SNRNP35Q16560 246 aaKnown RBP16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 RNF25Q96BH1 459 aaPredicted RBP16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 CALR3Q96L12 384 aaKnown RBP16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 FAM217BQ9NTX9 383 aaPredicted RBP16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 TMX2Q9Y320 296 aa16.71■□□□□ 0.27
CARMIL3-201ENST00000342740 PRKCBP05771 671 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 HOXA10P31260 410 aaPredicted RBP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 MSH2P43246 934 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 PRKCEQ02156 737 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 SUCLA2Q9P2R7 463 aaPredicted RBP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 ESYT3A0FGR9 886 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 EIF3BP55884 814 aaKnown RBP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 XRRA1Q6P2D8 792 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 FAM163AQ96GL9 167 aaPredicted RBP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 GINM1Q9NU53 330 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 KBTBD4Q9NVX7 518 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 ACSL3O95573 720 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 SHMT1P34896 483 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 AP3M2P53677 418 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 INPP5FQ9Y2H2 1132 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 PFASO15067 1338 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 EXOC1LA0A1B0GW35 172 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 GMNNO75496 209 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 GTF2A1P52655 376 aaPredicted RBP16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 TMED2Q15363 201 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 NBPF9Q3BBW0 867 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 RNF139Q8WU17 664 aa16.7■□□□□ 0.26
CARMIL3-201ENST00000342740 PSMC1P62191 440 aaKnown RBP16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SPATS2Q86XZ4 545 aaKnown RBP16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 GSDMBQ8TAX9 411 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 FUCA2Q9BTY2 467 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 FHOD1Q9Y613 1164 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 GARSP41250 739 aaKnown RBP16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 TFDP2Q14188 446 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 MOXD1Q6UVY6 613 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 TRIM72Q6ZMU5 477 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SPATA4Q8NEY3 305 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SLC12A6Q9UHW9 1150 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 MED24O75448 989 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SREBF1P36956 1147 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 WDR72Q3MJ13 1102 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SMARCAD1Q9H4L7 1026 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 BAIAP2L1Q9UHR4 511 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 EIF3DO15371 548 aaKnown RBP eCLIP16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 EVI5O60447 810 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 NR1D1P20393 614 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 EARS2Q5JPH6 523 aaKnown RBP16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 CHST13Q8NET6 341 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 EXOC4Q96A65 974 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SCYL1Q96KG9 808 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 CCDC68Q9H2F9 335 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 ASNSD1Q9NWL6 643 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 PCSK1NQ9UHG2 260 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 SNX12Q9UMY4 172 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 AFG3L2Q9Y4W6 797 aa16.69■□□□□ 0.26
CARMIL3-201ENST00000342740 M0QYV0 167 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 EMC2Q15006 297 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 CENPUQ71F23 418 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 GSPT2Q8IYD1 628 aaKnown RBP16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 ANKRD13AQ8IZ07 590 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 BBS5Q8N3I7 341 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 PYROXD1Q8WU10 500 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 MKNK1Q9BUB5 465 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 KLK7P49862 253 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 PTF1AQ7RTS3 328 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 ERGIC2Q96RQ1 377 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 DDX4Q9NQI0 724 aaKnown RBP16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 CAPN7Q9Y6W3 813 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 ATP8B3O60423 1300 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 SLC25A27O95847 323 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 GALCP54803 685 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 ARL13BQ3SXY8 428 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 ANKEF1Q9NU02 776 aa16.68■□□□□ 0.26
CARMIL3-201ENST00000342740 TNPO2O14787 897 aaKnown RBP16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 SUN1O94901 812 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 NCAPGQ9BPX3 1015 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 TRIM10Q9UDY6 481 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 STK38LQ9Y2H1 464 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 GRID2IPA4D2P6 1211 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 TADA3O75528 432 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 SRGAP2BP0DMP2 458 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 SCP2P22307 547 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms