RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 RUNX1T1Q06455 604 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 MAPRE2Q15555 327 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 NMD3Q96D46 503 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 FAM81BQ96LP2 452 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 RANBP17Q9H2T7 1088 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 TUBA8Q9NY65 449 aaPredicted RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 ADD3Q9UEY8 706 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 KDM5DQ9BY66 1539 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 GRIN1Q05586 938 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 THOC5Q13769 683 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 MIS18BP1Q6P0N0 1132 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 GPR141Q7Z602 305 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 TRMT2AQ8IZ69 625 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 ZNF555Q8NEP9 628 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 RNPEPQ9H4A4 650 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 ATP1A1P05023 1023 aaKnown RBP18.68■□□□□ 0.58
SYDE2-202ENST00000341460 ZCCHC18P0CG32 403 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 MIEF2Q96C03 454 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 LRRC1Q9BTT6 524 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 DKK3Q9UBP4 350 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 YWHAHQ04917 246 aaPredicted RBP18.68■□□□□ 0.58
SYDE2-202ENST00000341460 R3HDM1Q15032 1099 aaKnown RBP18.68■□□□□ 0.58
SYDE2-202ENST00000341460 OSBPP22059 807 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 ERFEQ4G0M1 354 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 SIX5Q8N196 739 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 NACC1Q96RE7 527 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 SERPINB13Q9UIV8 391 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 MAGED2Q9UNF1 606 aaPredicted RBP18.68■□□□□ 0.58
SYDE2-202ENST00000341460 TMEM94Q12767 1356 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 H0YC42 278 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 CHRNA3P32297 505 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 CDH24Q86UP0 819 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 TBCKQ8TEA7 893 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 MTRQ99707 1265 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 AURKCQ9UQB9 309 aa18.68■□□□□ 0.58
SYDE2-202ENST00000341460 ARHGEF5Q12774 1597 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 ZNF589Q86UQ0 364 aaPredicted RBP18.67■□□□□ 0.58
SYDE2-202ENST00000341460 DHX36Q9H2U1 1008 aaKnown RBP18.67■□□□□ 0.58
SYDE2-202ENST00000341460 KMT5AQ9NQR1 393 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 PTPREP23469 700 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 SF3B3Q15393 1217 aaKnown RBP18.67■□□□□ 0.58
SYDE2-202ENST00000341460 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 GALNT4Q8N4A0 578 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 RASGRP4Q8TDF6 673 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 FAM8A1Q9UBU6 413 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 BMP3P12645 472 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 CLK1P49759 484 aaKnown RBP18.67■□□□□ 0.58
SYDE2-202ENST00000341460 UBXN2AP68543 259 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 CLEC17AQ6ZS10 378 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 CDHR1Q96JP9 859 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 THTPAQ9BU02 230 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 TMEM206Q9H813 350 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 SCTRP47872 440 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 SUPT20HL1Q3ZLR7 823 aa18.67■□□□□ 0.58
SYDE2-202ENST00000341460 HOXA7P31268 230 aaPredicted RBP18.66■□□□□ 0.58
SYDE2-202ENST00000341460 E4F1Q66K89 784 aaPredicted RBP18.66■□□□□ 0.58
SYDE2-202ENST00000341460 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 AKT3Q9Y243 479 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 KDM6BO15054 1643 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 PJA2O43164 708 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 LRRN2O75325 713 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 MMP1P03956 469 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 YY1P25490 414 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 PIGSQ96S52 555 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 APOL6Q9BWW8 343 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 QTRT2Q9H974 415 aaKnown RBP18.66■□□□□ 0.58
SYDE2-202ENST00000341460 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 ALDH18A1P54886 795 aaKnown RBP18.66■□□□□ 0.58
SYDE2-202ENST00000341460 RNF217Q8TC41 542 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 ARL8AQ96BM9 186 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 CAAP1Q9H8G2 361 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 SMG5Q9UPR3 1016 aaKnown RBP18.66■□□□□ 0.58
SYDE2-202ENST00000341460 ATP7BP35670 1465 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 WDR64B1ANS9 1081 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 NCK2O43639 380 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 TERB1Q8NA31 727 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 KLHL23Q8NBE8 558 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 CALML6Q8TD86 181 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 CYGBQ8WWM9 190 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 KCNA1Q09470 495 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 RCN1Q15293 331 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 SFR1Q86XK3 245 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 USP33Q8TEY7 942 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 GCNT4Q9P109 453 aa18.66■□□□□ 0.58
SYDE2-202ENST00000341460 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
SYDE2-202ENST00000341460 C4BPBP20851 252 aa18.65■□□□□ 0.58
SYDE2-202ENST00000341460 ADARP55265 1226 aaKnown RBP18.65■□□□□ 0.58
SYDE2-202ENST00000341460 RNPC3Q96LT9 517 aaKnown RBP18.65■□□□□ 0.58
SYDE2-202ENST00000341460 PDHBP11177 359 aa18.65■□□□□ 0.58
SYDE2-202ENST00000341460 CCND2P30279 289 aa18.65■□□□□ 0.58
SYDE2-202ENST00000341460 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
SYDE2-202ENST00000341460 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms