RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 S100BP04271 92 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 LONP1P36776 959 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 MAGEA9P43362 315 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 CCT2P78371 535 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 AKAP17AQ02040 695 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SP2Q02086 613 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PTK2Q05397 1052 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ENPEPQ07075 957 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 COASYQ13057 564 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SMAD2Q15796 467 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ZNF528Q3MIS6 628 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ARHGEF16Q5VV41 709 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PTCRAQ6ISU1 281 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 C4orf19Q8IY42 314 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 NECAB1Q8N987 351 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PCSK9Q8NBP7 692 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 TBC1D5Q92609 795 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 KAT2BQ92831 832 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PABPC5Q96DU9 382 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 CRELD1Q96HD1 420 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 FAM129BQ96TA1 746 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 HSD17B14Q9BPX1 270 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PAGR1Q9BTK6 254 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 KATNAL1Q9BW62 490 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 USP25Q9UHP3 1055 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SMC3Q9UQE7 1217 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 A0A1W2PQ27 194 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 A0A1W2PQ64 194 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 A0A1W2PQD8 194 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 FRMD3A2A2Y4 597 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ZEB2O60315 1214 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 DKC1O60832 514 aaKnown RBP eCLIP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 LRP3O75074 770 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 F13A1P00488 732 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SUPT20HL2P0C7V6 817 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ELNP15502 786 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ATF4P18848 351 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 RXRAP19793 462 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 CCND3P30281 292 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 NUCB2P80303 420 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 POU5F1Q01860 360 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 MGAT3Q09327 533 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SERINC3Q13530 473 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SLC39A14Q15043 492 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 EPHA7Q15375 998 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 USP17L6PQ6QN14 398 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 TMEM184AQ6ZMB5 413 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 LINC00528Q8N1L1 170 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SVOPQ8N4V2 548 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 TBCKQ8TEA7 893 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 FAM167AQ96KS9 214 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PYM1Q9BRP8 204 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 CUEDC2Q9H467 287 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ST6GALNAC4Q9H4F1 302 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 KCNH7Q9NS40 1196 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ANKEF1Q9NU02 776 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 TMEM260Q9NX78 707 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 FBXO2Q9UK22 296 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 NOL7Q9UMY1 257 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 CEP131Q9UPN4 1083 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 HPSEQ9Y251 543 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 CTDP1Q9Y5B0 961 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SRPRBQ9Y5M8 271 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 TSC2P49815 1807 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 MYL1P05976 194 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PGK2P07205 417 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 MAPTP10636 758 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 GNA15P30679 374 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ABCD1P33897 745 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 NLRP5P59047 1200 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 HTRA4P83105 476 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 AMPD3Q01432 767 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 TNFAIP2Q03169 654 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 MTMR1Q13613 665 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 TRIM29Q14134 588 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 UBE2SQ16763 222 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ZNF484Q5JVG2 852 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 C16orf59Q7L2K0 433 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 DPP9Q86TI2 863 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 STK11IPQ8N1F8 1099 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 Q8N3U1 123 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ADAM32Q8TC27 787 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ALKBH8Q96BT7 664 aaKnown RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 VWCEQ96DN2 955 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 AIFM3Q96NN9 605 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 MTG1Q9BT17 334 aaPredicted RBP3.92□□□□□ -1.78
CCDC66-202ENST00000341455 CNPY2Q9Y2B0 182 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ANK1P16157 1881 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 A0A1W2PQ45 241 aaPredicted RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 A0A1W2PQY0 241 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 WDR64B1ANS9 1081 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 ARVCFO00192 962 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 SLC37A4O43826 429 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 CCNE2O96020 404 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 OR52Z1P0C646 297 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 RARBP10826 455 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 TAL1P17542 331 aaPredicted RBP3.91□□□□□ -1.78
CCDC66-202ENST00000341455 RPA1P27694 616 aa3.91□□□□□ -1.78
CCDC66-202ENST00000341455 EIF1AXP47813 144 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms