RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 C22orf31O95567 290 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 FGBP02675 491 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 RSPH10BP0C881 870 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 MASP1P48740 699 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 EPHA7Q15375 998 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 TTC38Q5R3I4 469 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 MTHFD1LQ6UB35 978 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 LINC01465Q8N7H1 131 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 TRAPPC12Q8WVT3 735 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 TMEM60Q9H2L4 133 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.48□□□□□ -0.578e-7■■■■■ 194.6
TPM3-207ENST00000341372 KBTBD4Q9NVX7 518 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 NOL7Q9UMY1 257 aaKnown RBP11.48□□□□□ -0.57
TPM3-207ENST00000341372 CEP131Q9UPN4 1083 aa11.48□□□□□ -0.57
TPM3-207ENST00000341372 BAIAP3O94812 1187 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 TOB1P50616 345 aaPredicted RBP11.47□□□□□ -0.57
TPM3-207ENST00000341372 PSMC5P62195 406 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 SMAD3P84022 425 aaKnown RBP11.47□□□□□ -0.57
TPM3-207ENST00000341372 TARBP2Q15633 366 aaKnown RBP11.47□□□□□ -0.57
TPM3-207ENST00000341372 C4orf48Q5BLP8 95 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 DEFB128Q7Z7B8 93 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 CEP89Q96ST8 783 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 MTIF3Q9H2K0 278 aaKnown RBP11.47□□□□□ -0.57
TPM3-207ENST00000341372 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 KDM3AQ9Y4C1 1321 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 GBF1Q92538 1859 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 ACTN1P12814 892 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 KLRC1P26715 233 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 MCM7P33993 719 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 XKR3Q5GH77 459 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 PTCRAQ6ISU1 281 aaPredicted RBP11.47□□□□□ -0.57
TPM3-207ENST00000341372 CNKSR3Q6P9H4 555 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 RSPH3Q86UC2 560 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 ETFBKMTQ8IXQ9 262 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 C4orf32Q8N8J7 132 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 DNAJB3Q8WWF6 145 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 ZBTB10Q96DT7 871 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 C8orf48Q96LL4 319 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 SPON2Q9BUD6 331 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 NIFKQ9BYG3 293 aaKnown RBP11.47□□□□□ -0.57
TPM3-207ENST00000341372 TTC12Q9H892 705 aaPredicted RBP11.47□□□□□ -0.57
TPM3-207ENST00000341372 NRBP2Q9NSY0 501 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 SERTAD1Q9UHV2 236 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
TPM3-207ENST00000341372 LOXHD1Q8IVV2 1947 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 H3BQV1 296 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 MAGEB2O15479 319 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 DKC1O60832 514 aaKnown RBP eCLIP11.46□□□□□ -0.57
TPM3-207ENST00000341372 CHRNA1P02708 482 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 OR52Z1P0C646 297 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 PDCP20941 246 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 QARSP47897 775 aaKnown RBP11.46□□□□□ -0.57
TPM3-207ENST00000341372 GDF10P55107 478 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 MAP9Q49MG5 647 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 RILPL1Q5EBL4 403 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 LARP1BQ659C4 914 aaKnown RBP11.46□□□□□ -0.57
TPM3-207ENST00000341372 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 NME8Q8N427 588 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 NEK9Q8TD19 979 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 LRCH3Q96II8 777 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 WRAP73Q9P2S5 460 aaPredicted RBP11.46□□□□□ -0.57
TPM3-207ENST00000341372 EFR3BQ9Y2G0 817 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 SQORQ9Y6N5 450 aa11.46□□□□□ -0.57
TPM3-207ENST00000341372 LYPLA2O95372 231 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 MRPS6P82932 125 aaKnown RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 ZNF174Q15697 407 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 TCTN1Q2MV58 587 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 C4orf46Q504U0 113 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 NCAPH2Q6IBW4 605 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 C4orf19Q8IY42 314 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 DNAJC7Q99615 494 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 HSD17B14Q9BPX1 270 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 LXNQ9BS40 222 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 CNTN3Q9P232 1028 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 PCDHB6Q9Y5E3 794 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 LAMA2P24043 3122 aaKnown RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 IGKV6-21A0A0C4DH24 114 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 EFCAB14O75071 495 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 IRS1P35568 1242 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 TXKP42681 527 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 ARSHQ5FYA8 562 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 ANO5Q75V66 913 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 KIAA0319LQ8IZA0 1049 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 FAM160A2Q8N612 972 aaPredicted RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 EIF2AK1Q9BQI3 630 aaKnown RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 FTOQ9C0B1 505 aaKnown RBP eCLIP11.45□□□□□ -0.587e-6■■□□□ 12.9
TPM3-207ENST00000341372 FAM49AQ9H0Q0 323 aaPredicted RBP11.45□□□□□ -0.58
TPM3-207ENST00000341372 TRPV2Q9Y5S1 764 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 CDY2AQ9Y6F7 541 aa11.45□□□□□ -0.58
TPM3-207ENST00000341372 TMEM265A0A087WTH1 108 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 ABHD14A-ACY1A0A1B0GW23 586 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 POTEMA6NI47 508 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 LAD1O00515 517 aa11.44□□□□□ -0.58
TPM3-207ENST00000341372 ST13P50502 369 aaKnown RBP11.44□□□□□ -0.58
TPM3-207ENST00000341372 RAB15P59190 212 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms