RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SETQ01105 290 aaPredicted RBP18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 MTERF2Q49AM1 385 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 RSPH1Q8WYR4 309 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 STAMQ92783 540 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 TCEANC2Q96MN5 208 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 RHOBTB2Q9BYZ6 727 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 SLC2A4RGQ9NR83 387 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 FAN1Q9Y2M0 1017 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 MTF2Q9Y483 593 aaPredicted RBP18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 PCDHB2Q9Y5E7 798 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 NUMBLQ9Y6R0 609 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 CHD8Q9HCK8 2581 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 IGKV6-21A0A0C4DH24 114 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 CARNS1A5YM72 827 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 hCG_1984214I3L0E3 225 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 CHMP2AO43633 222 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 KINO60870 393 aaKnown RBP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 POMCP01189 267 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 ALDH2P05091 517 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 SKIP12755 728 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 SFPQP23246 707 aaKnown RBP eCLIP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 CDC27P30260 824 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 STARD6P59095 220 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 AAMPQ13685 434 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 RTN1Q16799 776 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 VARS2Q5ST30 1063 aaKnown RBP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 KIAA0319Q5VV43 1072 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 GET4Q7L5D6 327 aaPredicted RBP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 RNF168Q8IYW5 571 aaPredicted RBP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 ZNF713Q8N859 430 aaPredicted RBP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 NXPE3Q969Y0 559 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 HERC2P3Q9BVR0 1158 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 UNC45AQ9H3U1 944 aa18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 RBM28Q9NW13 759 aaKnown RBP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 PRG3Q9Y2Y8 225 aaPredicted RBP18.43■□□□□ 0.54
NECTIN1-202ENST00000340882 MSH4O15457 936 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 PAPLNO95428 1278 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 GLUD1P00367 558 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 URODP06132 367 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 ADH1AP07327 375 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 CIITAP33076 1130 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 GPC5P78333 572 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 UBXN11Q5T124 520 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 CREB3L3Q68CJ9 461 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 CATSPER4Q7RTX7 472 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 MRPL10Q7Z7H8 261 aaKnown RBP18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 PALB2Q86YC2 1186 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 RHPN2Q8IUC4 686 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 URGCPQ8TCY9 931 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 B3GALT6Q96L58 329 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 TMEM175Q9BSA9 504 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 NT5C3AQ9H0P0 336 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 GLT8D2Q9H1C3 349 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 RXFP1Q9HBX9 757 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 SEPT9Q9UHD8 586 aaPredicted RBP18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 USP24Q9UPU5 2620 aa18.42■□□□□ 0.54
NECTIN1-202ENST00000340882 CACNA1GO43497 2377 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 DCDC2BA2VCK2 349 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 RAB27AP51159 221 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 SNW1Q13573 536 aaKnown RBP18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 NECTIN1Q15223 517 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 CYP26C1Q6V0L0 522 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 FGF14Q92915 247 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 NIFKQ9BYG3 293 aaKnown RBP18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 RSAD1Q9HA92 442 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 IFT122Q9HBG6 1241 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 SUCLA2Q9P2R7 463 aaPredicted RBP18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 NCDNQ9UBB6 729 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 CHD6Q8TD26 2715 aa18.41■□□□□ 0.54
NECTIN1-202ENST00000340882 NOTCH4Q99466 2003 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 TGM1P22735 817 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 PFKFB3Q16875 520 aaPredicted RBP18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 PARM1Q6UWI2 310 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 ZNF410Q86VK4 478 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 GLYCTKQ8IVS8 523 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 COLGALT2Q8IYK4 626 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 PGBD4Q96DM1 585 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 NLRP4Q96MN2 994 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 FAM193BQ96PV7 902 aaPredicted RBP18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 ZMYND12Q9H0C1 365 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 MINDY3Q9H8M7 445 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 PIDD1Q9HB75 910 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 AGPAT5Q9NUQ2 364 aa18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 SPATA6Q9NWH7 488 aaPredicted RBP18.4■□□□□ 0.54
NECTIN1-202ENST00000340882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.4■□□□□ 0.547e-6■■■■□ 20.5
NECTIN1-202ENST00000340882 ZBTB43O43298 467 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 TGM5O43548 720 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 HOXA11P31270 313 aaPredicted RBP18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 OR1G1P47890 313 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 GLUD2P49448 558 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 DSG1Q02413 1049 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 CSTF1Q05048 431 aaKnown RBP18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 ZNF528Q3MIS6 628 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 SLC5A5Q92911 643 aa18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 DDX23Q9BUQ8 820 aaKnown RBP18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 INO80BQ9C086 356 aaPredicted RBP18.39■□□□□ 0.53
NECTIN1-202ENST00000340882 MIOSQ9NXC5 875 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms