RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MSH4O15457 936 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 ZNF75DP51815 510 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 LONRF2Q1L5Z9 754 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 TAF2Q6P1X5 1199 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 STMN4Q9H169 189 aaPredicted RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 KCND2Q9NZV8 630 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 GOLGA8CPA6NN73 597 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 ARP10275 920 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 YBX3P16989 372 aaKnown RBP eCLIP13.78□□□□□ -0.27e-8■□□□□ 10.3
LIN54-201ENST00000340417 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 GDAP1Q8TB36 358 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 PSMB7Q99436 277 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 NGRNQ9NPE2 291 aaKnown RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 IRAK4Q9NWZ3 460 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 IMPACTQ9P2X3 320 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 IL18RAPO95256 599 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 TSTA3Q13630 321 aaPredicted RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 TRIM62Q9BVG3 475 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 PTPROQ16827 1216 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 LMBRD2Q68DH5 695 aaPredicted RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 DYRK4Q9NR20 520 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 MOCS2O96007 188 aaPredicted RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 DNAJB2P25686 324 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 CCL23P55773 120 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 TROAPQ12815 778 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 NOP9Q86U38 636 aaKnown RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 EFCAB13Q8IY85 973 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 C7orf61Q8IZ16 206 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 NAPGQ99747 312 aaPredicted RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 FEZ2Q9UHY8 353 aaPredicted RBP13.78□□□□□ -0.2
LIN54-201ENST00000340417 SH3BP1Q9Y3L3 701 aa13.78□□□□□ -0.2
LIN54-201ENST00000340417 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.2
LIN54-201ENST00000340417 TUBB4AP04350 444 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 CCDC144BQ3MJ40 725 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 KCTD6Q8NC69 237 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 OSMRQ99650 979 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 TRIM31Q9BZY9 425 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 PPFIA4O75335 1185 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 ZNF280AP59817 542 aaPredicted RBP13.77□□□□□ -0.2
LIN54-201ENST00000340417 KRT39Q6A163 491 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 SDE2Q6IQ49 451 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 DDX53Q86TM3 631 aaKnown RBP13.77□□□□□ -0.2
LIN54-201ENST00000340417 TMEM35BQ8NCS4 154 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 FAN1Q9Y2M0 1017 aa13.77□□□□□ -0.2
LIN54-201ENST00000340417 INSRRP14616 1297 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 WDR72Q3MJ13 1102 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 RGPD8O14715 1765 aaPredicted RBP13.77□□□□□ -0.21
LIN54-201ENST00000340417 UQCRHLA0A096LP55 91 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 PCSK1P29120 753 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 STAP1Q9ULZ2 295 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 MON2Q7Z3U7 1717 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 ASTN2O75129 1339 aaPredicted RBP13.77□□□□□ -0.21
LIN54-201ENST00000340417 LRP6O75581 1613 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 SREBF1P36956 1147 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 CALN1Q9BXU9 219 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 AGO4Q9HCK5 861 aaKnown RBP13.77□□□□□ -0.21
LIN54-201ENST00000340417 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 IGSF9BQ9UPX0 1349 aa13.77□□□□□ -0.21
LIN54-201ENST00000340417 SLC26A4O43511 780 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 PRPF31Q8WWY3 499 aaKnown RBP13.76□□□□□ -0.21
LIN54-201ENST00000340417 UBE4BO95155 1302 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 BUB1O43683 1085 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 ALDH2P05091 517 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 ST8SIA6P61647 398 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 TAOK1Q7L7X3 1001 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 SGO2Q562F6 1265 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
LIN54-201ENST00000340417 TTC1Q99614 292 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 ODC1P11926 461 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 VAV2P52735 878 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 SENP7Q9BQF6 1050 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 KRT33BQ14525 404 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 PASD1Q8IV76 773 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 HINFPQ9BQA5 517 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
LIN54-201ENST00000340417 B3GAT3O94766 335 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 CDR2LQ86X02 465 aaPredicted RBP13.75□□□□□ -0.21
LIN54-201ENST00000340417 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 TLDC2A0PJX2 215 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 IRF1P10914 325 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 CASP1P29466 404 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 SYT10Q6XYQ8 523 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
LIN54-201ENST00000340417 HSPBP1Q9NZL4 362 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 TJP2Q9UDY2 1190 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 DNAJC12Q9UKB3 198 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 LTBP3Q9NS15 1303 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 KRT1P04264 644 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 CLTAP09496 248 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms