RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 FAM177A1Q8N128 213 aaPredicted RBP17.51■□□□□ 0.39
LINC01116-202ENST00000339037 DAGLBQ8NCG7 672 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 ATOH1Q92858 354 aaPredicted RBP17.51■□□□□ 0.39
LINC01116-202ENST00000339037 PGBD4Q96DM1 585 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 AGPAT5Q9NUQ2 364 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 FRYLO94915 3013 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 GFRA3O60609 400 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 OFD1O75665 1012 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 ASGR2P07307 311 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 SLC11A1P49279 550 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 NPY5RQ15761 445 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 INF2Q27J81 1249 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 CPLX2Q6PUV4 134 aaKnown RBP17.5■□□□□ 0.39
LINC01116-202ENST00000339037 KRT25Q7Z3Z0 450 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 PPFIBP1Q86W92 1011 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 ZDHHC14Q8IZN3 488 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 URGCPQ8TCY9 931 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 IFT122Q9HBG6 1241 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 CYP26B1Q9NR63 512 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 DNAJB4Q9UDY4 337 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 STK39Q9UEW8 545 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 USTQ9Y2C2 406 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 PCDHB2Q9Y5E7 798 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 COL4A3BPQ9Y5P4 624 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
LINC01116-202ENST00000339037 H0Y858 1186 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 SLC37A4O43826 429 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 QARSP47897 775 aaKnown RBP17.49■□□□□ 0.39
LINC01116-202ENST00000339037 PPP2R5CQ13362 524 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 PTPN14Q15678 1187 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 LETM2Q2VYF4 491 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 TMC5Q6UXY8 1006 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 ZNF280BQ86YH2 543 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 SLC22A17Q8WUG5 538 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 ZNF274Q96GC6 653 aaPredicted RBP17.49■□□□□ 0.39
LINC01116-202ENST00000339037 AIFM3Q96NN9 605 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 VN1R3Q9BXE9 311 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
LINC01116-202ENST00000339037 SMOC2Q9H3U7 446 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 SFXN1Q9H9B4 322 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 ZSWIM6Q9HCJ5 1215 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 LIMD1Q9UGP4 676 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 VAV3Q9UKW4 847 aa17.49■□□□□ 0.39
LINC01116-202ENST00000339037 MYO10Q9HD67 2058 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 EML1O00423 815 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 GALR2O43603 387 aaPredicted RBP17.48■□□□□ 0.39
LINC01116-202ENST00000339037 B4GALT3O60512 393 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 DKC1O60832 514 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC01116-202ENST00000339037 TIE1P35590 1138 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 NPEPPSP55786 919 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 EXOC8Q8IYI6 725 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 PRPF31Q8WWY3 499 aaKnown RBP17.48■□□□□ 0.39
LINC01116-202ENST00000339037 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
LINC01116-202ENST00000339037 CEP170P1Q96L14 293 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 FAM20AQ96MK3 541 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 EMILIN2Q9BXX0 1053 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 RSAD1Q9HA92 442 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 PPME1Q9Y570 386 aa17.48■□□□□ 0.39
LINC01116-202ENST00000339037 CNTNAP2Q9UHC6 1331 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 CCDC194A0A1B0GVG4 234 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 TTLL13PA6NNM8 815 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 SSBP05455 408 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC01116-202ENST00000339037 SRGAP2CP0DJJ0 459 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 RFC5P40937 340 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 STK3Q13188 491 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 AGMOQ6ZNB7 445 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 CCDC149Q6ZUS6 474 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 SRGAP1Q7Z6B7 1085 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 TMEM143Q96AN5 459 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 ACSF2Q96CM8 615 aaPredicted RBP17.47■□□□□ 0.39
LINC01116-202ENST00000339037 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
LINC01116-202ENST00000339037 MFSD1Q9H3U5 465 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 DHX33Q9H6R0 707 aaKnown RBP17.47■□□□□ 0.39
LINC01116-202ENST00000339037 KCNMB3Q9NPA1 279 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 KCNJ14Q9UNX9 436 aa17.47■□□□□ 0.39
LINC01116-202ENST00000339037 DDHD2O94830 711 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 NEFLP07196 543 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 P4HBP07237 508 aaKnown RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 GCFC2P16383 781 aaKnown RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 KLRC2P26717 231 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 CLCN4P51793 760 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 AFF1P51825 1210 aaKnown RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 LAMTOR4Q0VGL1 99 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 OTOP3Q7RTS5 596 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 NEK8Q86SG6 692 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 GPR149Q86SP6 731 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 TMEM105Q8N8V8 129 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 FAM193BQ96PV7 902 aaPredicted RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 LXNQ9BS40 222 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 MINDY3Q9H8M7 445 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 MRPL17Q9NRX2 175 aaKnown RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 BMP2KQ9NSY1 1161 aaPredicted RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 WRAP73Q9P2S5 460 aaPredicted RBP17.46■□□□□ 0.39
LINC01116-202ENST00000339037 FAM186AA6NE01 2351 aa17.46■□□□□ 0.39
LINC01116-202ENST00000339037 GVINP1Q7Z2Y8 2422 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms