RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TCEAL1Q15170 157 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 LRRC26Q2I0M4 334 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 ARSHQ5FYA8 562 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 SLFN13Q68D06 897 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 TTBK2Q6IQ55 1244 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
RTN3-201ENST00000338850 STXBP4Q6ZWJ1 553 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.53
RTN3-201ENST00000338850 IRF2BP2Q7Z5L9 587 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 RASGEF1CQ8N431 466 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 LMBR1Q8WVP7 490 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 GOPCQ9HD26 462 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 VAV3Q9UKW4 847 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 PPP1R9AQ9ULJ8 1098 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 RRP15Q9Y3B9 282 aaKnown RBP11.73□□□□□ -0.53
RTN3-201ENST00000338850 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 MYO1CO00159 1063 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 VWA5AO00534 786 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
RTN3-201ENST00000338850 KIF4AO95239 1232 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SLC25A27O95847 323 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 CCDC172P0C7W6 258 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SPATA31C1P0DKV0 1188 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 UCHL3P15374 230 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
RTN3-201ENST00000338850 MAGEA10P43363 369 aaPredicted RBP11.72□□□□□ -0.53
RTN3-201ENST00000338850 ZNF131P52739 623 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 HADHBP55084 474 aaKnown RBP11.72□□□□□ -0.53
RTN3-201ENST00000338850 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 PPP2R5AQ15172 486 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 LRRC41Q15345 812 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 EPHA7Q15375 998 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 CATSPER3Q86XQ3 398 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 RIOX2Q8IUF8 465 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SLC9A9Q8IVB4 645 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 IQCKQ8N0W5 287 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 LRRC57Q8N9N7 239 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 C3orf20Q8ND61 904 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 GLIS3Q8NEA6 775 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 REPS2Q8NFH8 660 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SCFD2Q8WU76 684 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SEC14L1Q92503 715 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 TBC1D5Q92609 795 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 BORCS6Q96GS4 357 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 RUFY1Q96T51 708 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 RASSF4Q9H2L5 321 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SLITRK6Q9H5Y7 841 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 RBM12Q9NTZ6 932 aaKnown RBP11.72□□□□□ -0.53
RTN3-201ENST00000338850 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
RTN3-201ENST00000338850 FEZ2Q9UHY8 353 aaPredicted RBP11.72□□□□□ -0.53
RTN3-201ENST00000338850 GGA2Q9UJY4 613 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 ODF2LQ9ULJ1 636 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 PARP14Q460N5 1801 aa11.72□□□□□ -0.53
RTN3-201ENST00000338850 ASTN1O14525 1302 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 A0A087X0T9 212 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 EIF3HO15372 352 aaKnown RBP eCLIP11.71□□□□□ -0.53
RTN3-201ENST00000338850 PALMO75781 387 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 KRT18P05783 430 aaKnown RBP11.71□□□□□ -0.53
RTN3-201ENST00000338850 FAM228BP0C875 321 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
RTN3-201ENST00000338850 MAGEA9P43362 315 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 GYS2P54840 703 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 CORO7P57737 925 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 PPP2R5CQ13362 524 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 ALCAMQ13740 583 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 DNAJC21Q5F1R6 531 aaKnown RBP11.71□□□□□ -0.53
RTN3-201ENST00000338850 SYDE2Q5VT97 1194 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 KDM7AQ6ZMT4 941 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 FBXO11Q86XK2 927 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 EFCAB13Q8IY85 973 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 TAF4BQ92750 862 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 SLC35C1Q96A29 364 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 MAML3Q96JK9 1138 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 REEP2Q9BRK0 252 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 ISCUQ9H1K1 167 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 EHMT1Q9H9B1 1298 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 NLRC4Q9NPP4 1024 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 NAGPAQ9UK23 515 aa11.71□□□□□ -0.53
RTN3-201ENST00000338850 ZNF214Q9UL59 606 aaPredicted RBP11.71□□□□□ -0.53
RTN3-201ENST00000338850 FRMPD3Q5JV73 1810 aa11.71□□□□□ -0.54
RTN3-201ENST00000338850 GRIN2DO15399 1336 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 HMGB1P1B2RPK0 211 aaPredicted RBP11.7□□□□□ -0.54
RTN3-201ENST00000338850 F5H6K3 240 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 DNM1LO00429 736 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 MAPK13O15264 365 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 PMM2O15305 246 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 P4HA2O15460 535 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 SEPT4O43236 478 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 RAD21O60216 631 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 TBCAO75347 108 aaKnown RBP11.7□□□□□ -0.54
RTN3-201ENST00000338850 HEXIM1O94992 359 aaKnown RBP11.7□□□□□ -0.54
RTN3-201ENST00000338850 NDUFB10O96000 172 aa11.7□□□□□ -0.54
RTN3-201ENST00000338850 NR3C1P04150 777 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms