RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
CBX3-201ENST00000337620 TPM1P09493 284 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 PURAQ00577 322 aaKnown RBP16.06■□□□□ 0.16
CBX3-201ENST00000337620 TMEM174Q8WUU8 243 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 BORCS6Q96GS4 357 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 ERGIC2Q96RQ1 377 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 PPP1R16BQ96T49 567 aa16.06■□□□□ 0.16
CBX3-201ENST00000337620 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.06■□□□□ 0.16
CBX3-201ENST00000337620 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
CBX3-201ENST00000337620 VTNP04004 478 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 GYPCP04921 128 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 CASP14P31944 242 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 PPP2R3AQ06190 1150 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 CDCA2Q69YH5 1023 aaPredicted RBP16.05■□□□□ 0.16
CBX3-201ENST00000337620 NFRKBQ6P4R8 1299 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 LINC01465Q8N7H1 131 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 KCNN1Q92952 543 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 SAAL1Q96ER3 474 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 BEGAINQ9BUH8 593 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 KATNAL1Q9BW62 490 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 TARS2Q9BW92 718 aaKnown RBP16.05■□□□□ 0.16
CBX3-201ENST00000337620 C2orf40Q9H1Z8 148 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 XPNPEP3Q9NQH7 507 aa16.05■□□□□ 0.16
CBX3-201ENST00000337620 ESPNB1AK53 854 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 HAS3O00219 553 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
CBX3-201ENST00000337620 MSNP26038 577 aaKnown RBP16.04■□□□□ 0.16
CBX3-201ENST00000337620 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 MMRN2Q9H8L6 949 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 INO80B-WBP1J3KQ70 363 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 KPNA6O60684 536 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 EDN1P05305 212 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 KRT13P13646 458 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 TRIM21P19474 475 aaKnown RBP16.04■□□□□ 0.16
CBX3-201ENST00000337620 GARTP22102 1010 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 MATR3P43243 847 aaKnown RBP eCLIP16.04■□□□□ 0.16
CBX3-201ENST00000337620 TRIM14Q14142 442 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 MAPK6Q16659 721 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 TC2NQ8N9U0 490 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 PXYLP1Q8TE99 480 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 SLC35C1Q96A29 364 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 CRACR2AQ9BSW2 395 aa16.04■□□□□ 0.16
CBX3-201ENST00000337620 INO80BQ9C086 356 aaPredicted RBP16.04■□□□□ 0.16
CBX3-201ENST00000337620 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
CBX3-201ENST00000337620 A0A087WZ62 844 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 ZEB2O60315 1214 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 PRKCBP05771 671 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 SKILP12757 684 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
CBX3-201ENST00000337620 PTENP60484 403 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 KIAA0319LQ8IZA0 1049 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 C7orf31Q8N865 590 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 ZBTB45Q96K62 511 aaPredicted RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 FDXACB1Q9BRP7 624 aaPredicted RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 MTG1Q9BT17 334 aaPredicted RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 CCDC113Q9H0I3 377 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 FAM49AQ9H0Q0 323 aaPredicted RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 SIK3Q9Y2K2 1263 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 MSCO60682 206 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 PIGRP01833 764 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 PHKA2P46019 1235 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 BFSP1Q12934 665 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 SNRNP35Q16560 246 aaKnown RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 INTS8Q75QN2 995 aaKnown RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 CBWD2Q8IUF1 395 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 NUP58Q9BVL2 599 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 FAM207AQ9NSI2 230 aaPredicted RBP16.03■□□□□ 0.16
CBX3-201ENST00000337620 ANKFY1Q9P2R3 1169 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 HDAC6Q9UBN7 1215 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
CBX3-201ENST00000337620 TTC26A0AVF1 554 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 RNF225M0QZC1 329 aaPredicted RBP16.02■□□□□ 0.16
CBX3-201ENST00000337620 NRDCO43847 1150 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 ADAMTS4O75173 837 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 CSDE1O75534 798 aaKnown RBP16.02■□□□□ 0.16
CBX3-201ENST00000337620 TRIM49P0CI25 452 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 TRIM49CP0CI26 452 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 CYP2C9P11712 490 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 CCZ1BP86790 482 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.16
CBX3-201ENST00000337620 KCNMA1Q12791 1236 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 HIC1Q14526 733 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 SLFN12LQ6IEE8 588 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 CNGA4Q8IV77 575 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 FAM213AQ9BRX8 229 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 IFT122Q9HBG6 1241 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 TRIM17Q9Y577 477 aa16.02■□□□□ 0.16
CBX3-201ENST00000337620 C17orf102A2RUQ5 167 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 MFAP3LO75121 409 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 VAMP7P51809 220 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms