RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SKA2Q8WVK7 121 aaPredicted RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 FEM1BQ9UK73 627 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 APOBEC2Q9Y235 224 aaKnown RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 NPHP3-ACAD11A0A0J9YXS1 232 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 HAUS5O94927 633 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 GGPS1O95749 300 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 HSPA4LO95757 839 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 SFNP31947 248 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 CASP2P42575 452 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 CIAPIN1Q6FI81 312 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 ZBED8Q8IZ13 594 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 LRRC43Q8N309 656 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 PIP4K2CQ8TBX8 421 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 NSUN6Q8TEA1 469 aaKnown RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 KCNB2Q92953 911 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 SNF8Q96H20 258 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 CROCC2H7BZ55 1655 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 TBXAS1P24557 533 aaPredicted RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 PDIA2Q13087 525 aaKnown RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 NCAPHQ15003 741 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 EPHA7Q15375 998 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 ENOSF1Q7L5Y1 443 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 ASNSD1Q9NWL6 643 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 GABBR1Q9UBS5 961 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 ESYT2A0FGR8 921 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 TRIM66O15016 1216 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 EIF3HO15372 352 aaKnown RBP eCLIP14.65□□□□□ -0.06
RTN4-202ENST00000337526 PSMC5P62195 406 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 MDM2Q00987 491 aaPredicted RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 SLC27A3Q5K4L6 730 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 IZUMO3Q5VZ72 239 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 ZC3H18Q86VM9 953 aaKnown RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 MARCH10Q8NA82 808 aaPredicted RBP14.65□□□□□ -0.06
RTN4-202ENST00000337526 EPN3Q9H201 632 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 SMARCAL1Q9NZC9 954 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 HPCAL4Q9UM19 191 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 UBE4BO95155 1302 aa14.65□□□□□ -0.06
RTN4-202ENST00000337526 KRT7P08729 469 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 SCP2P22307 547 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 ZNF543Q08ER8 600 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 STXBP2Q15833 593 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 PRPF38AQ8NAV1 312 aaKnown RBP14.64□□□□□ -0.07
RTN4-202ENST00000337526 HAUS8Q9BT25 410 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 KLC4Q9NSK0 619 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 CYP26A1O43174 497 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 C21orf2O43822 256 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 FGFR4P22455 802 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 PDIA6Q15084 440 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 SWSAP1Q6NVH7 229 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 KRT27Q7Z3Y8 459 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 ELOA2Q8IYF1 753 aaPredicted RBP14.64□□□□□ -0.07
RTN4-202ENST00000337526 NCAPGQ9BPX3 1015 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 STK33Q9BYT3 514 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 SLC9A2Q9UBY0 812 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 ANGPTL3Q9Y5C1 460 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 PLEKHG2Q9H7P9 1386 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 PPP1R3GB7ZBB8 358 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 SPAG7O75391 227 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 METTL23Q86XA0 190 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 PARP9Q8IXQ6 854 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 VPS39Q96JC1 886 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 FUCA2Q9BTY2 467 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 IP6K2Q9UHH9 426 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 CFAP73A6NFT4 308 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 MGEA5O60502 916 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 ARFIP2P53365 341 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 GPSM2P81274 684 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 PTPAQ15257 358 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 SLC35G2Q8TBE7 412 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 RNF146Q9NTX7 359 aa14.64□□□□□ -0.07
RTN4-202ENST00000337526 CARSP49589 748 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 PSMC1P62191 440 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 KRT17Q04695 432 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 RNF168Q8IYW5 571 aaPredicted RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 ZNF34Q8IZ26 560 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 TTLL6Q8N841 843 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 HNRNPLLQ8WVV9 542 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 LCMT1Q9UIC8 334 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 FNDC3AQ9Y2H6 1198 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 KCNQ2O43526 872 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 PPFIA2O75334 1257 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 ANXA13P27216 316 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 IRAK1P51617 712 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 IL1RL1Q01638 556 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 OCRLQ01968 901 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 ARL13BQ3SXY8 428 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 RTKN2Q8IZC4 609 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 ATL2Q8NHH9 583 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 PSPC1Q8WXF1 523 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 DRC3Q9H069 523 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 GNGT2O14610 69 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 RTN2O75298 545 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 SLC9A1P19634 815 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 OSBPP22059 807 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 SLC12A1Q13621 1099 aa14.63□□□□□ -0.07
RTN4-202ENST00000337526 SF3B3Q15393 1217 aaKnown RBP14.63□□□□□ -0.07
RTN4-202ENST00000337526 EDRF1Q3B7T1 1238 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms