RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 HIPK4Q8NE63 616 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 TAF1DQ9H5J8 278 aaPredicted RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 MAGED2Q9UNF1 606 aaPredicted RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 GOLGA8JA6NMD2 632 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 PIK3R2O00459 728 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 USP17L8P0C7I0 530 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 MTMR1Q13613 665 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 CDO1Q16878 200 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 CEP78Q5JTW2 689 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 RARS2Q5T160 578 aaKnown RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 NLRP4Q96MN2 994 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 VPS11Q9H270 941 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 GOLGA8IPA6NC78 632 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 H0Y626 953 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 ZNF197O14709 1029 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 TRIM16O95361 564 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 OSTNP61366 133 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 EFHC2Q5JST6 749 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 TIPINQ9BVW5 301 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 ADAM21Q9UKJ8 722 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 PSMD3O43242 534 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 EIF2AK2P19525 551 aaKnown RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 SLC1A1P43005 524 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 CIAPIN1Q6FI81 312 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 LRRC8BQ6P9F7 803 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 EXT2Q93063 718 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 KDM4CQ9H3R0 1056 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 ZSCAN32Q9NX65 697 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 H0Y3Z8 333 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 STAT4Q14765 748 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 MTHFD1LQ6UB35 978 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 HDDC2Q7Z4H3 204 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 GUF1Q8N442 669 aaKnown RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 SLC26A7Q8TE54 656 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 WWP1Q9H0M0 922 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 FARP1Q9Y4F1 1045 aaPredicted RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 IL10P22301 178 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 ROR1Q01973 937 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 RAD51Q06609 339 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 TBC1D23Q9NUY8 699 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 FAM95CA0A1B0GW59 222 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 PDCLQ13371 301 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 TRAF7Q6Q0C0 670 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 RINLQ6ZS11 566 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 PLEKHM3Q6ZWE6 761 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 FNDC3AQ9Y2H6 1198 aaKnown RBP13.87□□□□□ -0.19
HLCS-201ENST00000336648 LRRC53A6NM62 1247 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
HLCS-201ENST00000336648 P4HBP07237 508 aaKnown RBP13.87□□□□□ -0.19
HLCS-201ENST00000336648 OCM2P0CE71 109 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 OCMP0CE72 109 aaPredicted RBP13.87□□□□□ -0.19
HLCS-201ENST00000336648 LAMB3Q13751 1172 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 PPP4R4Q6NUP7 873 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 ADCK1Q86TW2 530 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 SFR1Q86XK3 245 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 URGCPQ8TCY9 931 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
HLCS-201ENST00000336648 ATP6V1G3Q96LB4 118 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 ADGRL3Q9HAR2 1447 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 NSUN2Q08J23 767 aaKnown RBP eCLIP13.87□□□□□ -0.19
HLCS-201ENST00000336648 KCNH2Q12809 1159 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 GANCQ8TET4 914 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 OSBPL9Q96SU4 736 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 FAM167BQ9BTA0 163 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 BRAFP15056 766 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 MAGOHP61326 146 aaKnown RBP13.87□□□□□ -0.19
HLCS-201ENST00000336648 PARP9Q8IXQ6 854 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 PPP1R2P1Q96PQ5 205 aa13.87□□□□□ -0.19
HLCS-201ENST00000336648 ASCC2Q9H1I8 757 aaPredicted RBP13.87□□□□□ -0.19
HLCS-201ENST00000336648 PTCH1Q13635 1447 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 VAMP7P51809 220 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 COASYQ13057 564 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 ALX1Q15699 326 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 DDX50Q9BQ39 737 aaKnown RBP13.86□□□□□ -0.19
HLCS-201ENST00000336648 NUP85Q9BW27 656 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
HLCS-201ENST00000336648 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 E5RI56 91 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 H7C1W4 665 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 ZNF263O14978 683 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 FAM83BQ5T0W9 1011 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 HACD3Q9P035 362 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 ATP1A3P13637 1013 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 CDC25AP30304 524 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 STAT3P40763 770 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 RASGRF1Q13972 1273 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 FASTKD5Q7L8L6 764 aaKnown RBP13.86□□□□□ -0.19
HLCS-201ENST00000336648 THNSL1Q8IYQ7 743 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 RAB42Q8N4Z0 105 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 RFFLQ8WZ73 363 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 TGS1Q96RS0 853 aaKnown RBP13.86□□□□□ -0.19
HLCS-201ENST00000336648 FTOQ9C0B1 505 aaKnown RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms