RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 IRS1P35568 1242 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 ALDH7A1P49419 539 aaKnown RBP12.56□□□□□ -0.4
MRPL55-203ENST00000336520 KRT17Q04695 432 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 HYAL1Q12794 435 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 UBXN11Q5T124 520 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
MRPL55-203ENST00000336520 HACE1Q8IYU2 909 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 CNNM3Q8NE01 707 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 DEPTORQ8TB45 409 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 BSNDQ8WZ55 320 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
MRPL55-203ENST00000336520 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
MRPL55-203ENST00000336520 UHRF1Q96T88 793 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-203ENST00000336520 GBP3Q9H0R5 595 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 CSRNP2Q9H175 543 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 C2orf40Q9H1Z8 148 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 TBC1D13Q9NVG8 400 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 NCOR1O75376 2440 aa12.56□□□□□ -0.4
MRPL55-203ENST00000336520 PLXNA4Q9HCM2 1894 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 ATG2AQ2TAZ0 1938 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 H3BQ06 376 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 B4GALT5O43286 388 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 OFD1O75665 1012 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 ITGA4P13612 1032 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 LIG1P18858 919 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 NCLP19338 710 aaKnown RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 SYT1P21579 422 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 NAMPTP43490 491 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 BCAR1P56945 870 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 AMHR2Q16671 573 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 LEXMQ3ZCV2 418 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 CDCA2Q69YH5 1023 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 AGMOQ6ZNB7 445 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 MRPL10Q7Z7H8 261 aaKnown RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 KIFAP3Q92845 792 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 MMTAG2Q9BU76 263 aaKnown RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 TLE6Q9H808 572 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 POLD4Q9HCU8 107 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 PRMT7Q9NVM4 692 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-203ENST00000336520 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 IPPQ9Y573 584 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 PCDHGC5Q9Y5F6 944 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 BDP1A6H8Y1 2624 aa12.55□□□□□ -0.4
MRPL55-203ENST00000336520 CARNS1A5YM72 827 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 NT5C1B-RDH14C9J2C7 533 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 NPTXRO95502 500 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 PRKCBP05771 671 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 GTF2F1P35269 517 aaKnown RBP eCLIP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 UBA7P41226 1012 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 NRIP1P48552 1158 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 ERVFC1P60507 584 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 PRPF4BQ13523 1007 aaKnown RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 COL19A1Q14993 1142 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 MAPK6Q16659 721 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 PLPP4Q5VZY2 271 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 SLC27A1Q6PCB7 646 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 ADGRD2Q7Z7M1 963 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 CABP7Q86V35 215 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 CDR2LQ86X02 465 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 SLC39A11Q8N1S5 342 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 TMEM169Q96HH4 297 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 AK8Q96MA6 479 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 NECAB3Q96P71 396 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 PLIN2Q99541 437 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 RUSC1Q9BVN2 902 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 NT5C3AQ9H0P0 336 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 UBN1Q9NPG3 1134 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 KANSL3Q9P2N6 904 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 HES2Q9Y543 173 aa12.54□□□□□ -0.4
MRPL55-203ENST00000336520 TCF20Q9UGU0 1960 aaKnown RBP12.54□□□□□ -0.4
MRPL55-203ENST00000336520 CCDC169A6NNP5 214 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 HIP1RO75146 1068 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 POMCP01189 267 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
MRPL55-203ENST00000336520 CA8P35219 290 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 MLH1P40692 756 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 NDUFV1P49821 464 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 EFNA5P52803 228 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 SF3A1Q15459 793 aaKnown RBP12.53□□□□□ -0.4
MRPL55-203ENST00000336520 FAM187BQ17R55 369 aa12.53□□□□□ -0.4
MRPL55-203ENST00000336520 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
MRPL55-203ENST00000336520 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms