RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 FAM228BP0C875 321 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 KLRC1P26715 233 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 TMOD1P28289 359 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 GUCY2FP51841 1108 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 TCP10Q12799 353 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 PABPC4Q13310 644 aaKnown RBP eCLIP22.23■■□□□ 1.152e-8■■■□□ 16.4
SPNS1-203ENST00000334536 ABCB5Q2M3G0 1257 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 FAM133AQ8N9E0 248 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 HINFPQ9BQA5 517 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 VCXQ9H320 206 aa22.23■■□□□ 1.15
SPNS1-203ENST00000334536 TYW1Q9NV66 732 aaKnown RBP22.23■■□□□ 1.15
SPNS1-203ENST00000334536 PHF20L1A8MW92 1017 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 PLSCR1O15162 318 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 EYA4O95677 639 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 NDUFB10O96000 172 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 SLURP2P0DP57 97 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 GAP43P17677 238 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 CASP5P51878 434 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 NCALDP61601 193 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 PSMC6P62333 389 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 ANO7Q6IWH7 933 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 DPY19L2Q6NUT2 758 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 UIMC1Q96RL1 719 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 PSMB7Q99436 277 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 ZWILCHQ9H900 591 aa22.22■■□□□ 1.15
SPNS1-203ENST00000334536 ATP6V1C1P21283 382 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 TNNC1P63316 161 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 DACT2Q5SW24 774 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 IRF2BP2Q7Z5L9 587 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 ERICH1Q86X53 443 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 RAB17Q9H0T7 212 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 SERPINA10Q9UK55 444 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 VAV3Q9UKW4 847 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 FAM196BA6NMK8 535 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 FAM86B1E9PN63 330 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 PIK3CDO00329 1044 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 FAM86B2P0C5J1 330 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 BMP3P12645 472 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 XRCC5P13010 732 aaKnown RBP22.21■■□□□ 1.15
SPNS1-203ENST00000334536 GBP1P32455 592 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 CTNNA1P35221 906 aaKnown RBP22.21■■□□□ 1.15
SPNS1-203ENST00000334536 HOXD13P35453 343 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 PRKCIP41743 596 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 EXOC3L4Q17RC7 722 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 KIAA0825Q8IV33 1275 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 TLCD1Q96CP7 247 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 DBNDD1Q9H9R9 158 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 ARHGEF3Q9NR81 526 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 SMARCAL1Q9NZC9 954 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 CNOT8Q9UFF9 292 aaKnown RBP22.21■■□□□ 1.15
SPNS1-203ENST00000334536 ADAMTS1Q9UHI8 967 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 PHF24Q9UPV7 400 aa22.21■■□□□ 1.15
SPNS1-203ENST00000334536 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
SPNS1-203ENST00000334536 MSH4O15457 936 aa22.2■■□□□ 1.14
SPNS1-203ENST00000334536 UCHL3P15374 230 aa22.2■■□□□ 1.14
SPNS1-203ENST00000334536 ACADSP16219 412 aa22.2■■□□□ 1.14
SPNS1-203ENST00000334536 CDC25CP30307 473 aa22.2■■□□□ 1.14
SPNS1-203ENST00000334536 CACNB3P54284 484 aa22.2■■□□□ 1.14
SPNS1-203ENST00000334536 SH3BGRP55822 239 aaPredicted RBP22.2■■□□□ 1.14
SPNS1-203ENST00000334536 EIF3BP55884 814 aaKnown RBP22.2■■□□□ 1.14
SPNS1-203ENST00000334536 GALNTL6Q49A17 601 aa22.2■■□□□ 1.14
SPNS1-203ENST00000334536 EHD2Q9NZN4 543 aa22.2■■□□□ 1.14
SPNS1-203ENST00000334536 GTPBP10A4D1E9 387 aaKnown RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 MEIS1O00470 390 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 TBCAO75347 108 aaKnown RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 ENTPD3O75355 529 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 PON1P27169 355 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 EPHA7Q15375 998 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 NFIL3Q16649 462 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 SHROOM1Q2M3G4 852 aaPredicted RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 FBF1Q8TES7 1133 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 LZICQ8WZA0 190 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 INPP4AQ96PE3 977 aaPredicted RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 FAM167BQ9BTA0 163 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 OLFML3Q9NRN5 406 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 ATRNL1Q5VV63 1379 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 COL2A1P02458 1487 aaPredicted RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 HIP1RO75146 1068 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 NR3C1P04150 777 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 RARAP10276 462 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 SKIV2L2P42285 1042 aaKnown RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 ARID5AQ03989 594 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 KLC1Q07866 573 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 IKQ13123 557 aaPredicted RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 ARMC3Q5W041 872 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 MAIP1Q8WWC4 291 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 TAF4BQ92750 862 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 MS4A14Q96JA4 679 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 EIF2AK1Q9BQI3 630 aaKnown RBP22.19■■□□□ 1.14
SPNS1-203ENST00000334536 RABGAP1Q9Y3P9 1069 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 KIF13BQ9NQT8 1826 aa22.19■■□□□ 1.14
SPNS1-203ENST00000334536 BHMG1C9JSJ3 638 aaPredicted RBP22.18■■□□□ 1.14
SPNS1-203ENST00000334536 EIF3DO15371 548 aaKnown RBP eCLIP22.18■■□□□ 1.143e-8■■■□□ 16.2
SPNS1-203ENST00000334536 FTCDO95954 541 aa22.18■■□□□ 1.14
SPNS1-203ENST00000334536 SLC9A1P19634 815 aa22.18■■□□□ 1.14
SPNS1-203ENST00000334536 MSH2P43246 934 aa22.18■■□□□ 1.14
SPNS1-203ENST00000334536 PTK2Q05397 1052 aa22.18■■□□□ 1.14
SPNS1-203ENST00000334536 SLC15A2Q16348 729 aa22.18■■□□□ 1.14
SPNS1-203ENST00000334536 USH1GQ495M9 461 aa22.18■■□□□ 1.14
SPNS1-203ENST00000334536 ACBD5Q5T8D3 534 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms