RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 GCOM2Q9BZD3 368 aaPredicted RBP17.65■□□□□ 0.42
NSMCE3-201ENST00000332303 MTMR4Q9NYA4 1195 aa17.65■□□□□ 0.42
NSMCE3-201ENST00000332303 USP42Q9H9J4 1324 aaKnown RBP17.65■□□□□ 0.42
NSMCE3-201ENST00000332303 PMS2P54278 862 aa17.65■□□□□ 0.42
NSMCE3-201ENST00000332303 SF3B3Q15393 1217 aaKnown RBP17.65■□□□□ 0.42
NSMCE3-201ENST00000332303 HEATR6Q6AI08 1181 aaKnown RBP17.65■□□□□ 0.42
NSMCE3-201ENST00000332303 TBC1D1Q86TI0 1168 aaPredicted RBP17.65■□□□□ 0.42
NSMCE3-201ENST00000332303 KIAA0391O15091 583 aaKnown RBP17.64■□□□□ 0.42
NSMCE3-201ENST00000332303 SBK1Q52WX2 424 aa17.64■□□□□ 0.42
NSMCE3-201ENST00000332303 PDXDC1Q6P996 788 aa17.64■□□□□ 0.42
NSMCE3-201ENST00000332303 EPM2AIP1Q7L775 607 aaPredicted RBP17.64■□□□□ 0.42
NSMCE3-201ENST00000332303 ZBTB18Q99592 522 aa17.64■□□□□ 0.42
NSMCE3-201ENST00000332303 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.42
NSMCE3-201ENST00000332303 KCNQ2O43526 872 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 MDM2Q00987 491 aaPredicted RBP17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 YWHAHQ04917 246 aaPredicted RBP17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 ATP5HO75947 161 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 GUCY1A2P33402 732 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 MAGOHP61326 146 aaKnown RBP17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 ZNF543Q08ER8 600 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 FSCBQ5H9T9 825 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 METTL16Q86W50 562 aaKnown RBP17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 PPM1NQ8N819 430 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 CDC26Q8NHZ8 85 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 EXT2Q93063 718 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 TRIM4Q9C037 500 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 ZC3H15Q8WU90 426 aaKnown RBP17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 VPS11Q9H270 941 aa17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 DDX56Q9NY93 547 aaKnown RBP17.64■□□□□ 0.41
NSMCE3-201ENST00000332303 INPP1P49441 399 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 SPATA33Q96N06 139 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 MYCBPQ99417 103 aaPredicted RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 TIPINQ9BVW5 301 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 ESYT3A0FGR9 886 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 GGPS1O95749 300 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 BRAFP15056 766 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 TERF2Q15554 542 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 GRAMD1BQ3KR37 738 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 ANKRD40Q6AI12 368 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 DHX40Q8IX18 779 aaKnown RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 KRT82Q9NSB4 513 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 FAM217BQ9NTX9 383 aaPredicted RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 TRPA1O75762 1119 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 APOEP02649 317 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 TAP1Q03518 808 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 KCNV1Q6PIU1 500 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 GYG2O15488 501 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 NCK2O43639 380 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 CSPG5O95196 566 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 GGCXP38435 758 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 GPS1Q13098 491 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 EFHC2Q5JST6 749 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 HP1BP3Q5SSJ5 553 aaPredicted RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 FAM102AQ5T9C2 384 aaPredicted RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 RNF219Q5W0B1 726 aaPredicted RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 ATP11CQ8NB49 1132 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 OTUD5Q96G74 571 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 CRAMP1Q96RY5 1269 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 MRPL46Q9H2W6 279 aaKnown RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 LIMA1Q9UHB6 759 aaKnown RBP17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 HPCAL4Q9UM19 191 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 DAGLAQ9Y4D2 1042 aa17.63■□□□□ 0.41
NSMCE3-201ENST00000332303 ASB14A6NK59 587 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 KYAT1Q16773 422 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 CCDC137Q6PK04 289 aaKnown RBP17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 NOP9Q86U38 636 aaKnown RBP17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 MED14O60244 1454 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 A8MXQ7 604 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 GOLGA8MH3BSY2 632 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 PDCD2Q16342 344 aaPredicted RBP17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 ITPRIPL1Q6GPH6 555 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 TMEM60Q9H2L4 133 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 PI4K2BG5E9Z4 385 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 MYCP01106 439 aaPredicted RBP17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 EEF1B2P24534 225 aaKnown RBP17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 COPS2P61201 443 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 KIAA1755Q5JYT7 1200 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 ACAD11Q709F0 780 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 IGDCC4Q8TDY8 1250 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 RGL1Q9NZL6 768 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 SLC13A4Q9UKG4 626 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 CRB1P82279 1406 aa17.62■□□□□ 0.41
NSMCE3-201ENST00000332303 CREB3O43889 395 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 DGAT1O75907 488 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 CDKL3Q8IVW4 592 aaPredicted RBP17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 TBC1D16Q8TBP0 767 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 ZNF560Q96MR9 790 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 ZBED2Q9BTP6 218 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 JPH1Q9HDC5 661 aaPredicted RBP17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 SUCLA2Q9P2R7 463 aaPredicted RBP17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 STAT5BP51692 787 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 PPP2R2AP63151 447 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 DEUP1Q05D60 604 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 DRP2Q13474 957 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 DHX34Q14147 1143 aaKnown RBP17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 KIF19Q2TAC6 998 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 STRIP1Q5VSL9 837 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 IFT43Q96FT9 208 aa17.61■□□□□ 0.41
NSMCE3-201ENST00000332303 MMP19Q99542 508 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms