RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 AXLP30530 894 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 PTENP60484 403 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 STK4Q13043 487 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 PAK1Q13153 545 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
C11orf54-201ENST00000331239 KNOP1Q1ED39 458 aaKnown RBP10.41□□□□□ -0.74
C11orf54-201ENST00000331239 ZPBP2Q6X784 338 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 HAUS6Q7Z4H7 955 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 ZC3H3Q8IXZ2 948 aaKnown RBP10.41□□□□□ -0.74
C11orf54-201ENST00000331239 USP38Q8NB14 1042 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 KIAA0895Q8NCT3 520 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 DEPTORQ8TB45 409 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 CAGE1Q8TC20 777 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 PRPF31Q8WWY3 499 aaKnown RBP10.41□□□□□ -0.74
C11orf54-201ENST00000331239 STARD7Q9NQZ5 370 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 SETD4Q9NVD3 440 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 NPHP3-ACAD11A0A0J9YXS1 232 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 TLR3O15455 904 aaKnown RBP10.41□□□□□ -0.74
C11orf54-201ENST00000331239 GNA14O95837 355 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 CYP2C9P11712 490 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 SLFN12LQ6IEE8 588 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 ANKRD33Q7Z3H0 272 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 MAP4K3Q8IVH8 894 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 VSTM4Q8IW00 320 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 CCDC51Q96ER9 411 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 CEP63Q96MT8 703 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 TYW1Q9NV66 732 aaKnown RBP10.41□□□□□ -0.74
C11orf54-201ENST00000331239 PRMT7Q9NVM4 692 aaPredicted RBP10.41□□□□□ -0.74
C11orf54-201ENST00000331239 FANCLQ9NW38 375 aa10.41□□□□□ -0.74
C11orf54-201ENST00000331239 CCP110O43303 1012 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 TFRCP02786 760 aaKnown RBP10.4□□□□□ -0.74
C11orf54-201ENST00000331239 PRCPP42785 496 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 CRYBB1P53674 252 aaPredicted RBP10.4□□□□□ -0.74
C11orf54-201ENST00000331239 PEX3P56589 373 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 MTFR1Q15390 333 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 SPATA1Q5VX52 437 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 FAM114A1Q8IWE2 563 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 SCFD1Q8WVM8 642 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 P2RX5Q93086 422 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 GCOM2Q9BZD3 368 aaPredicted RBP10.4□□□□□ -0.74
C11orf54-201ENST00000331239 FZD8Q9H461 694 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 STYXL1Q9Y6J8 313 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 GRIN2DO15399 1336 aa10.4□□□□□ -0.74
C11orf54-201ENST00000331239 TMEM150BA6NC51 233 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 RSPH10B2B2RC85 870 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 M0QZ92 97 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 TUBB4AP04350 444 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 RSPH10BP0C881 870 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 SPAG1Q07617 926 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 STRN3Q13033 797 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 HS2ST1Q7LGA3 356 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 MKNK1Q9BUB5 465 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 MCOLN1Q9GZU1 580 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 CCDC113Q9H0I3 377 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 ADAMTS10Q9H324 1103 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 KCTD10Q9H3F6 313 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 THAP9Q9H5L6 903 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 SUGCTQ9HAC7 445 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 KIAA1586Q9HCI6 787 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 TBX20Q9UMR3 447 aa10.4□□□□□ -0.75
C11orf54-201ENST00000331239 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.4□□□□□ -0.75
C11orf54-201ENST00000331239 K7ENM7 598 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 K7ERI5 159 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 GCNT3O95395 438 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 GARTP22102 1010 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 CASP1P29466 404 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 GPC3P51654 580 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 CAPSQ13938 189 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 NAA30Q147X3 362 aaPredicted RBP10.39□□□□□ -0.75
C11orf54-201ENST00000331239 PTGISQ16647 500 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 ZCWPW2Q504Y3 356 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 METTL13Q8N6R0 699 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 TMEM143Q96AN5 459 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 TSPAN18Q96SJ8 248 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 ZHX3Q9H4I2 956 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 SLC39A2Q9NP94 309 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 CCDC169A6NNP5 214 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 ACKR2O00590 384 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 SLU7O95391 586 aaKnown RBP10.39□□□□□ -0.75
C11orf54-201ENST00000331239 MRPS6P82932 125 aaKnown RBP10.39□□□□□ -0.75
C11orf54-201ENST00000331239 FKBP3Q00688 224 aaKnown RBP10.39□□□□□ -0.75
C11orf54-201ENST00000331239 PPP2R3AQ06190 1150 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 BFSP2Q13515 415 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 MAPK6Q16659 721 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 GDF6Q6KF10 455 aaPredicted RBP10.39□□□□□ -0.75
C11orf54-201ENST00000331239 NELFBQ8WX92 580 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 MRPL4Q9BYD3 311 aaKnown RBP10.39□□□□□ -0.75
C11orf54-201ENST00000331239 INTS13Q9NVM9 706 aa10.39□□□□□ -0.75
C11orf54-201ENST00000331239 TRIP12Q14669 1992 aaPredicted RBP10.38□□□□□ -0.75
C11orf54-201ENST00000331239 SLC16A3O15427 465 aaKnown RBP10.38□□□□□ -0.75
C11orf54-201ENST00000331239 GPR32O75388 356 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 LDHAP00338 332 aaKnown RBP10.38□□□□□ -0.75
C11orf54-201ENST00000331239 CD4P01730 458 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
C11orf54-201ENST00000331239 MARSP56192 900 aaKnown RBP10.38□□□□□ -0.75
C11orf54-201ENST00000331239 IGBP1P78318 339 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms