RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PPATQ06203 517 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 TXNRD3Q86VQ6 643 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 NELFCDQ8IXH7 590 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 SNX29Q8TEQ0 813 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 DNAJC19Q96DA6 116 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 ZCWPW1Q9H0M4 648 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 C6orf50Q9HD87 102 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 NKIRAS1Q9NYS0 192 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 A0A1B0GUL6 1792 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 CICQ96RK0 1608 aaPredicted RBP26.12■■□□□ 1.77
SOX1-201ENST00000330949 GH1P01241 217 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 ZNF211Q13398 564 aaPredicted RBP26.12■■□□□ 1.77
SOX1-201ENST00000330949 CALCRLQ16602 461 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 PPP4R3CPQ6ZMV5 832 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 SUPT20HQ8NEM7 779 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 LRRC8CQ8TDW0 803 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 UCMAQ8WVF2 138 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 ART4Q93070 314 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 DCP1AQ9NPI6 582 aaPredicted RBP26.12■■□□□ 1.77
SOX1-201ENST00000330949 BMP2KQ9NSY1 1161 aaPredicted RBP26.12■■□□□ 1.77
SOX1-201ENST00000330949 RTCBQ9Y3I0 505 aaKnown RBP26.12■■□□□ 1.77
SOX1-201ENST00000330949 USH1CQ9Y6N9 552 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 MAPK13O15264 365 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 PON1P27169 355 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 ZC3H3Q8IXZ2 948 aaKnown RBP26.11■■□□□ 1.77
SOX1-201ENST00000330949 MTMR9Q96QG7 549 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 RPS6KL1Q9Y6S9 549 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 CREB3O43889 395 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 TMEM253P0C7T8 217 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 PLCG2P16885 1265 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 VCAM1P19320 739 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 ZRSR2Q15696 482 aaKnown RBP26.11■■□□□ 1.77
SOX1-201ENST00000330949 TBCKQ8TEA7 893 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 CTNNBL1Q8WYA6 563 aaPredicted RBP26.11■■□□□ 1.77
SOX1-201ENST00000330949 NSUN4Q96CB9 384 aaKnown RBP26.11■■□□□ 1.77
SOX1-201ENST00000330949 PCDHA3Q9Y5H8 950 aa26.11■■□□□ 1.77
SOX1-201ENST00000330949 CYTH3O43739 400 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 DCTN3O75935 186 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 RCN2Q14257 317 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 EDRF1Q3B7T1 1238 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 PPP1R21Q6ZMI0 780 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 CYFIP1Q7L576 1253 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 CCDC25Q86WR0 208 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 TIPINQ9BVW5 301 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 CACNA1SQ13698 1873 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 ECE2O60344 883 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 TTLL1O95922 423 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 RASA1P20936 1047 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 PSMC4P43686 418 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 KIAA1683Q9H0B3 1180 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 DENND2DQ9H6A0 471 aaPredicted RBP26.1■■□□□ 1.77
SOX1-201ENST00000330949 RRP1BQ14684 758 aaKnown RBP26.1■■□□□ 1.77
SOX1-201ENST00000330949 CCDC6Q16204 474 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 TMEM119Q4V9L6 283 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 TTC8Q8TAM2 541 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 STARD13Q9Y3M8 1113 aa26.1■■□□□ 1.77
SOX1-201ENST00000330949 ENTPD5O75356 428 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 PYGBP11216 843 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 EPHB2P29323 1055 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 OCRLQ01968 901 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 FOXB2Q5VYV0 432 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 PRELID2Q8N945 189 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 PPP1R12CQ9BZL4 782 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 KCTD10Q9H3F6 313 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 CDC42EP4Q9H3Q1 356 aaKnown RBP26.09■■□□□ 1.77
SOX1-201ENST00000330949 ATP8A2Q9NTI2 1148 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 DOT1LQ8TEK3 1739 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 ZNF804BA4D1E1 1349 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 SMCO2A6NFE2 343 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 TRAFD1O14545 582 aaPredicted RBP26.09■■□□□ 1.77
SOX1-201ENST00000330949 GOLGA8HP0CJ92 632 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 TAC1P20366 129 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 JAM2P57087 298 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 MPP2Q14168 576 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 SLC35G1Q2M3R5 365 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 ZNF568Q3ZCX4 644 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 CCDC137Q6PK04 289 aaKnown RBP26.09■■□□□ 1.77
SOX1-201ENST00000330949 KCNK18Q7Z418 384 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 PHC3Q8NDX5 983 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 SLC7A6OSQ96CW6 309 aaPredicted RBP26.09■■□□□ 1.77
SOX1-201ENST00000330949 PDP2Q9P2J9 529 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 SRP68Q9UHB9 627 aaKnown RBP26.09■■□□□ 1.77
SOX1-201ENST00000330949 CHKBQ9Y259 395 aa26.09■■□□□ 1.77
SOX1-201ENST00000330949 MAGEA13PA6NCF6 341 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 USP17L3A6NCW0 530 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 USP17L4A6NCW7 530 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 SIGLEC16A6NMB1 481 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 LMNB1P20700 586 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 KCNA3P22001 575 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 USP17L1Q7RTZ2 530 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 FRMD5Q7Z6J6 570 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 CCDC65Q8IXS2 484 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 SLC44A5Q8NCS7 719 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 GPR101Q96P66 508 aaPredicted RBP26.08■■□□□ 1.77
SOX1-201ENST00000330949 TBC1D7Q9P0N9 293 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 TULP1O00294 542 aaPredicted RBP26.08■■□□□ 1.77
SOX1-201ENST00000330949 IMPDH2P12268 514 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 CACNA2D1P54289 1103 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 IL9RQ01113 521 aa26.08■■□□□ 1.77
SOX1-201ENST00000330949 TFAP4Q01664 338 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms