RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 COPB2P35606 906 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 SPDYCQ5MJ68 293 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 CYFIP2Q96F07 1278 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 LXNQ9BS40 222 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 TEKT3Q9BXF9 490 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 TAOK3Q9H2K8 898 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
BRCC3-201ENST00000330045 ERVK-5Q9HDB9 667 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 CNOT8Q9UFF9 292 aaKnown RBP16.6■□□□□ 0.25
BRCC3-201ENST00000330045 FAM187AA6NFU0 413 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 TRAPPC3O43617 180 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 FSBPO95073 299 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 PTGER2P43116 358 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
BRCC3-201ENST00000330045 MAGOHP61326 146 aaKnown RBP16.6■□□□□ 0.25
BRCC3-201ENST00000330045 IFFO1Q0D2I5 559 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 MYBPC2Q14324 1141 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 SUGP1Q8IWZ8 645 aaKnown RBP16.6■□□□□ 0.25
BRCC3-201ENST00000330045 C3orf20Q8ND61 904 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 ALG3Q92685 438 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 MAGOHBQ96A72 148 aaKnown RBP16.6■□□□□ 0.25
BRCC3-201ENST00000330045 TXLNGYQ9BZA5 131 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 UBE2TQ9NPD8 197 aaPredicted RBP16.6■□□□□ 0.25
BRCC3-201ENST00000330045 ALG6Q9Y672 507 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 HADHBP55084 474 aaKnown RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 IFT88Q13099 833 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 MAPK7Q13164 816 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 DHX34Q14147 1143 aaKnown RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 RNF187Q5TA31 235 aaPredicted RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 MIGA2Q7L4E1 593 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 CCDC125Q86Z20 511 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 DAW1Q8N136 415 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 TMX2Q9Y320 296 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 MRPL11Q9Y3B7 192 aaKnown RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 BRCA1P38398 1863 aaKnown RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 MYH11P35749 1972 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 DCDC2CA8MYV0 355 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 K7ENM7 598 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 FNTAP49354 379 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 DLG4P78352 724 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 SETQ01105 290 aaPredicted RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 CETN1Q12798 172 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 B3GNT9Q6UX72 402 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 CNPY4Q8N129 248 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 OGFOD1Q8N543 542 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 SLC20A1Q8WUM9 679 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 GLG1Q92896 1179 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 RANBP17Q9H2T7 1088 aaKnown RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 ZDHHC18Q9NUE0 388 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 CTTNBP2NLQ9P2B4 639 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 HERC5Q9UII4 1024 aaKnown RBP16.59■□□□□ 0.25
BRCC3-201ENST00000330045 EMSYQ7Z589 1322 aa16.59■□□□□ 0.25
BRCC3-201ENST00000330045 H0YHG0 523 aa16.58■□□□□ 0.25
BRCC3-201ENST00000330045 IPO5O00410 1097 aaKnown RBP16.58■□□□□ 0.25
BRCC3-201ENST00000330045 FTLP02792 175 aaPredicted RBP16.58■□□□□ 0.25
BRCC3-201ENST00000330045 VCAM1P19320 739 aa16.58■□□□□ 0.25
BRCC3-201ENST00000330045 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.25
BRCC3-201ENST00000330045 C6orf89Q6UWU4 347 aa16.58■□□□□ 0.25
BRCC3-201ENST00000330045 INTS8Q75QN2 995 aaKnown RBP16.58■□□□□ 0.25
BRCC3-201ENST00000330045 PRPF38AQ8NAV1 312 aaKnown RBP16.58■□□□□ 0.25
BRCC3-201ENST00000330045 CHURC1Q8WUH1 139 aa16.58■□□□□ 0.25
BRCC3-201ENST00000330045 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.25
BRCC3-201ENST00000330045 LOXHD1Q8IVV2 1947 aa16.58■□□□□ 0.24
BRCC3-201ENST00000330045 MIF4GDA9UHW6 222 aaKnown RBP16.58■□□□□ 0.24
BRCC3-201ENST00000330045 PAEPP09466 180 aa16.58■□□□□ 0.24
BRCC3-201ENST00000330045 MAEAQ7L5Y9 396 aa16.58■□□□□ 0.24
BRCC3-201ENST00000330045 JAMLQ86YT9 394 aa16.58■□□□□ 0.24
BRCC3-201ENST00000330045 VTI1AQ96AJ9 217 aa16.58■□□□□ 0.24
BRCC3-201ENST00000330045 LRRC4CQ9HCJ2 640 aa16.58■□□□□ 0.24
BRCC3-201ENST00000330045 SYNGAP1Q96PV0 1343 aa16.58■□□□□ 0.24
BRCC3-201ENST00000330045 WNT10BO00744 389 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 VAMP7P51809 220 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 DRG2P55039 364 aaKnown RBP16.57■□□□□ 0.24
BRCC3-201ENST00000330045 C11orf63Q6NUN7 778 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 AADACL2Q6P093 401 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 PADI6Q6TGC4 694 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 ARHGEF19Q8IW93 802 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 UBL4BQ8N7F7 174 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 RAPGEF5Q92565 580 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.24
BRCC3-201ENST00000330045 TMEM206Q9H813 350 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 LARSQ9P2J5 1176 aaKnown RBP16.57■□□□□ 0.24
BRCC3-201ENST00000330045 DDX20Q9UHI6 824 aaKnown RBP16.57■□□□□ 0.24
BRCC3-201ENST00000330045 RASAL2Q9UJF2 1139 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 PFASO15067 1338 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 FER1L6Q2WGJ9 1857 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 DDX39AO00148 427 aaKnown RBP16.57■□□□□ 0.24
BRCC3-201ENST00000330045 GTF2A1P52655 376 aaPredicted RBP16.57■□□□□ 0.24
BRCC3-201ENST00000330045 PLTPP55058 493 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 GPC5P78333 572 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 SPDYE2Q495Y8 402 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 GRIPAP1Q4V328 841 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
BRCC3-201ENST00000330045 TLCD1Q96CP7 247 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 RIT2Q99578 217 aa16.57■□□□□ 0.24
BRCC3-201ENST00000330045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms