RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GNA14O95837 355 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 NLRP11P59045 1033 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 ADAM9Q13443 819 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 MAPK6Q16659 721 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 HSP90AA4PQ58FG1 418 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 SLC39A4Q6P5W5 647 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 ZPBP2Q6X784 338 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 FILIP1Q7Z7B0 1213 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 BICD1Q96G01 975 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 ZNF668Q96K58 619 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 CNOT6LQ96LI5 555 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 SCLT1Q96NL6 688 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 CTAGE1Q96RT6 745 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 MRPL4Q9BYD3 311 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 FZD8Q9H461 694 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 DMAC2Q9NW81 257 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 MAGEC2Q9UBF1 373 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 LIMA1Q9UHB6 759 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 CLIC2O15247 247 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 EDN1P05305 212 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 LIG4P49917 911 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 FANCCQ00597 558 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 PTGISQ16647 500 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 FAM187BQ17R55 369 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 KIZQ2M2Z5 673 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 TCP11X2Q5H9J9 407 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 RSPH3Q86UC2 560 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 ANKRD20A12PQ8NF67 263 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 U2AF1L4Q8WU68 220 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 PPP1R16BQ96T49 567 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 PRMT7Q9NVM4 692 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 TISP43B9A030 160 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 ANKRD63C9JTQ0 380 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 INO80B-WBP1J3KQ70 363 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 SGPL1O95470 568 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 PTK7Q13308 1070 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 KRT31Q15323 416 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 ARMCX5Q6P1M9 558 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 GCOM2Q9BZD3 368 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 INO80BQ9C086 356 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 STYXL1Q9Y6J8 313 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 CENPFP49454 3210 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 CNTNAP2Q9UHC6 1331 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 ARVCFO00192 962 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 ACKR2O00590 384 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 GARTP22102 1010 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 CYP2J2P51589 502 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 MARSP56192 900 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 MRPS6P82932 125 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 TMEM62Q0P6H9 643 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 APTXQ7Z2E3 356 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 PRIMPOLQ96LW4 560 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 CBWD1Q9BRT8 395 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
VIPAS39-201ENST00000327028 SERPINC1P01008 464 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 DARSP14868 501 aaKnown RBP11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 ADSSP30520 456 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 ZNF75DP51815 510 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 AMHR2Q16671 573 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 ANP32BQ92688 251 aaKnown RBP11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 WNT8BQ93098 351 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 ACO2Q99798 780 aaKnown RBP11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 TRIM5Q9C035 493 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 TRMT13Q9NUP7 481 aaKnown RBP11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 HSPBP1Q9NZL4 362 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 NOD1Q9Y239 953 aa11.21□□□□□ -0.62
VIPAS39-201ENST00000327028 KIAA0391O15091 583 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 CBFA2T2O43439 604 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 AKAP3O75969 853 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 ADCY5O95622 1261 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 TFRCP02786 760 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 EPB41P11171 864 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 CRYBB1P53674 252 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 PRPF4BQ13523 1007 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 PCBP1Q15365 356 aaKnown RBP eCLIP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 CCDC40Q4G0X9 1142 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 SLFN12LQ6IEE8 588 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 XXYLT1Q8NBI6 393 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 OSMRQ99650 979 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 IFNKQ9P0W0 207 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 TRPV2Q9Y5S1 764 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 LRRC10BA6NIK2 292 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 M0QZ92 97 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 EXOC3O60645 756 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 CAND2O75155 1236 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 IQCF3P0C7M6 154 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 CAPN2P17655 700 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 PSMC2P35998 433 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 MTIF2P46199 727 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 GJA8P48165 433 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 CDK7P50613 346 aa11.2□□□□□ -0.62
VIPAS39-201ENST00000327028 COPB1P53618 953 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms