RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 H7C0C1 242 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 SCP2P22307 547 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 IL6STP40189 918 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 ATP5OP48047 213 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 PMS2P54278 862 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 RAD23BP54727 409 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 EHHADHQ08426 723 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 PCDHB4Q9Y5E5 795 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 CALB1P05937 261 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 LRRC36Q1X8D7 754 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 PLA2G4DQ86XP0 818 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 EFHBQ8N7U6 833 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 DEPDC7Q96QD5 511 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 PSMB7Q99436 277 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 SNX25Q9H3E2 840 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 MAP3K15Q6ZN16 1313 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 MAP3K4Q9Y6R4 1608 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 KRT87PA6NCN2 255 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 CTDSPL2Q05D32 466 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 TBCCQ15814 346 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 SIX6OS1Q8N1H7 587 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 CNDP1Q96KN2 507 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 UBA2Q9UBT2 640 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 PNMA3Q9UL41 463 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 PNMA6EA0A0J9YXQ4 647 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 EXOC1LA0A1B0GW35 172 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 FAM200BP0CF97 657 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 PTCH1Q13635 1447 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 ABCB5Q2M3G0 1257 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 TAF1BQ53T94 588 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 DNAJC24Q6P3W2 148 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 CPXCR1Q8N123 301 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 FAM167AQ96KS9 214 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 TRIM51Q9BSJ1 452 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 SENP1Q9P0U3 644 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 KCNJ14Q9UNX9 436 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 KIAA1024Q9UPX6 916 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 GRID2IPA4D2P6 1211 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 TRIM24O15164 1050 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 CEBPAP49715 358 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 NDUFA8P51970 172 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 KCTD2Q14681 263 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 MRRFQ96E11 262 aaKnown RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 USP40Q9NVE5 1235 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 SUN2Q9UH99 717 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 JAK3P52333 1124 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 BTNL9Q6UXG8 535 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 ZMYND12Q9H0C1 365 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 EVPLLA8MZ36 301 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 TK2O00142 265 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 NVLO15381 856 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 RGS5O15539 181 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SPDYE2Q495Y8 402 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SHQ1Q6PI26 577 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 ABI1Q8IZP0 508 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 STK36Q9NRP7 1315 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 TBC1D4O60343 1298 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 AP3B2Q13367 1082 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 JAK2O60674 1132 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 CCND2P30279 289 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 TRAP1Q12931 704 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SPARCL1Q14515 664 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 CCDC142Q17RM4 750 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 FAM45BPQ6NSW5 357 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 ZBTB18Q99592 522 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 FBXO28Q9NVF7 368 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 PFASO15067 1338 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 ANO9A1A5B4 782 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 DLATP10515 647 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 ZAP70P43403 619 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 CTCFP49711 727 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 C15orf59Q2T9L4 293 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SUPT20HL1Q3ZLR7 823 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 CCDC153Q494R4 210 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SPOUT1Q5T280 376 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 MAPKAPK5Q8IW41 473 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 COPG2Q9UBF2 871 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 MYH6P13533 1939 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 BBOX1O75936 387 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 FGAP02671 866 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 APOA4P06727 396 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 PDIA3P30101 505 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 TAP1Q03518 808 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 BLZF1Q9H2G9 400 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 ZMYM1Q5SVZ6 1142 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 KIAA0408Q6ZU52 694 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SKA2Q8WVK7 121 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 SNTNA6NMZ2 147 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 MAP3K13O43283 966 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 PRPSAP2O60256 369 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 TGFBR2P37173 567 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 VCPP55072 806 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 FAM160B2Q86V87 743 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
COL12A1-201ENST00000322507 TRIM64A6NGJ6 449 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 TRIM64BA6NI03 449 aa10.29□□□□□ -0.76
COL12A1-201ENST00000322507 LRRIQ4A6NIV6 560 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms