RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SESTD1Q86VW0 696 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 CERS5Q8N5B7 392 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 FAM20AQ96MK3 541 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 ERGIC2Q96RQ1 377 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 DNAJC7Q99615 494 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 CNOT8Q9UFF9 292 aaKnown RBP16.35■□□□□ 0.21
VARS2-201ENST00000321897 MFAP3P55082 362 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 Q3C1V9 767 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 CFAP157Q5JU67 520 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 C10orf76Q5T2E6 689 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 HAUS6Q7Z4H7 955 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 XXYLT1Q8NBI6 393 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 PI4K2BG5E9Z4 385 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 KLRC4O43908 158 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 SHMT1P34896 483 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 HSD17B3P37058 310 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 RCN2Q14257 317 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 POP1Q99575 1024 aaKnown RBP16.35■□□□□ 0.21
VARS2-201ENST00000321897 G3BP2Q9UN86 482 aaKnown RBP16.35■□□□□ 0.21
VARS2-201ENST00000321897 PIK3R2O00459 728 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 ASNSP08243 561 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 BRD2P25440 801 aaKnown RBP16.35■□□□□ 0.21
VARS2-201ENST00000321897 USP11P51784 963 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
VARS2-201ENST00000321897 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
VARS2-201ENST00000321897 MMGT1Q8N4V1 131 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 SLC35G2Q8TBE7 412 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 RAPGEF5Q92565 580 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 BCAS3Q9H6U6 928 aa16.35■□□□□ 0.21
VARS2-201ENST00000321897 TCP11X1B4DZS4 312 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 FAM86B1E9PN63 330 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 F5H423 210 aaPredicted RBP16.34■□□□□ 0.21
VARS2-201ENST00000321897 FAM86B2P0C5J1 330 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 VAMP7P51809 220 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 RASA3Q14644 834 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 EAPPQ56P03 285 aaPredicted RBP16.34■□□□□ 0.21
VARS2-201ENST00000321897 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
VARS2-201ENST00000321897 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 CALR3Q96L12 384 aaKnown RBP16.34■□□□□ 0.21
VARS2-201ENST00000321897 WRNIP1Q96S55 665 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 NKRFO15226 690 aaKnown RBP eCLIP16.34■□□□□ 0.21
VARS2-201ENST00000321897 ANP32DO95626 131 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 CALCAP01258 141 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 RHBDL3P58872 404 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 ECM1Q16610 540 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 BRDTQ58F21 947 aaPredicted RBP16.34■□□□□ 0.21
VARS2-201ENST00000321897 TMEM270Q6UE05 265 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 HMGCS2P54868 508 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 BARGINQ6ZT62 677 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 ARHGAP27Q6ZUM4 889 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 MCF2L2Q86YR7 1114 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 FGFR1OP2Q9NVK5 253 aa16.34■□□□□ 0.21
VARS2-201ENST00000321897 REXO2Q9Y3B8 237 aaKnown RBP16.34■□□□□ 0.21
VARS2-201ENST00000321897 ARHGAP42A6NI28 874 aa16.33■□□□□ 0.21
VARS2-201ENST00000321897 TMEM191BP0C7N4 346 aa16.33■□□□□ 0.21
VARS2-201ENST00000321897 ATF2P15336 505 aa16.33■□□□□ 0.21
VARS2-201ENST00000321897 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.21
VARS2-201ENST00000321897 ZNF354CQ86Y25 554 aa16.33■□□□□ 0.21
VARS2-201ENST00000321897 PDCD7Q8N8D1 485 aaKnown RBP16.33■□□□□ 0.21
VARS2-201ENST00000321897 XPO6Q96QU8 1125 aaKnown RBP16.33■□□□□ 0.21
VARS2-201ENST00000321897 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.21
VARS2-201ENST00000321897 CIB2O75838 187 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 ITGA4P13612 1032 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 MTMR2Q13614 643 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 NPY5RQ15761 445 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 CCDC89Q8N998 374 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 MIPOL1Q8TD10 442 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 LRRC8CQ8TDW0 803 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 ANKS1AQ92625 1134 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 ABTB1Q969K4 478 aaPredicted RBP16.33■□□□□ 0.2
VARS2-201ENST00000321897 PBKQ96KB5 322 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 RNF146Q9NTX7 359 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 PFDN1O60925 122 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 DGKZQ13574 1117 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 CDO1Q16878 200 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 PITPNM3Q9BZ71 974 aa16.33■□□□□ 0.2
VARS2-201ENST00000321897 K7ERI5 159 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 EML1O00423 815 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 EYA4O95677 639 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 TRADDQ15628 312 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 KDM7AQ6ZMT4 941 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 DTX3LQ8TDB6 740 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 CBWD1Q9BRT8 395 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 CALN1Q9BXU9 219 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 DDX20Q9UHI6 824 aaKnown RBP16.32■□□□□ 0.2
VARS2-201ENST00000321897 DCTN4Q9UJW0 460 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 FAM237AA0A1B0GTK4 181 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 SGK1O00141 431 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 IGF2BP3O00425 579 aaKnown RBP eCLIP16.32■□□□□ 0.2
VARS2-201ENST00000321897 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
VARS2-201ENST00000321897 FMO5P49326 533 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
VARS2-201ENST00000321897 TNFAIP1Q13829 316 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 RINT1Q6NUQ1 792 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms