RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 CCL15-CCL14A0A0B4J2E2 113 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DDTLA6NHG4 134 aaPredicted RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MYBP10242 640 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 HOXA10P31260 410 aaPredicted RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ELF1P32519 619 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ECE1P42892 770 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CCL15Q16663 113 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZSCAN26Q16670 478 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ACAP3Q96P50 834 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TAAR1Q96RJ0 339 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZFYVE28Q9HCC9 887 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PDE1BQ01064 536 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ALS2CLQ60I27 953 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CATSPER3Q86XQ3 398 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 IP6K2Q9UHH9 426 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MSH4O15457 936 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FAM83AQ86UY5 434 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZKSCAN4Q969J2 545 aaPredicted RBP13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 KIF12Q96FN5 646 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PFDN4Q9NQP4 134 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SLC37A4O43826 429 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SCP2P22307 547 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MSH2P43246 934 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 NR1I3Q14994 352 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TRIP13Q15645 432 aaPredicted RBP13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 KCTD16Q68DU8 428 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CYP4F22Q6NT55 531 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 EMBQ6PCB8 327 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ASAP2O43150 1006 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 BACE1P56817 501 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 IL9RQ01113 521 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CXCL9Q07325 125 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TFDP2Q14188 446 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 LRRC8CQ8TDW0 803 aa13.71□□□□□ -0.21
SH3PXD2A-201ENST00000315994 EIF3BP55884 814 aaKnown RBP13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SLC7A5Q01650 507 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MICAL1Q8TDZ2 1067 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PRPF31Q8WWY3 499 aaKnown RBP13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 HVCN1Q96D96 273 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 AGPAT1Q99943 283 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 APEX2Q9UBZ4 518 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 FMO5P49326 533 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 GRIN1Q05586 938 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 GLYCTKQ8IVS8 523 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RFFLQ8WZ73 363 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ARHGEF2Q92974 986 aaKnown RBP13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 STK33Q9BYT3 514 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 EFCC1Q9HA90 598 aa13.71□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 DDR1Q08345 913 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 NTRK3Q16288 839 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 ZNF746Q6NUN9 644 aaPredicted RBP13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 INTS9Q9NV88 658 aaKnown RBP13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MUTP22033 750 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SREBF1P36956 1147 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CLCN6P51797 869 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 DONSONQ9NYP3 566 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SRGAP2O75044 1071 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SNRNP35Q16560 246 aaKnown RBP13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CENPUQ71F23 418 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 FAM163AQ96GL9 167 aaPredicted RBP13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 OSBPL9Q96SU4 736 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SH2D3AQ9BRG2 576 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MKNK1Q9BUB5 465 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 WNT8AQ9H1J5 351 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 FBXO28Q9NVF7 368 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SAT1P21673 171 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SDC4P31431 198 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 MAP2K2P36507 400 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 KCNJ6P48051 423 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 TAP1Q03518 808 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 CACYBPQ9HB71 228 aaKnown RBP13.7□□□□□ -0.22
SH3PXD2A-201ENST00000315994 UBE2Q2LH0YL09 131 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PSMC1P62191 440 aaKnown RBP13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 C15orf52Q6ZUT6 534 aaKnown RBP13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 KCNH4Q9UQ05 1017 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 DYNC1LI2O43237 492 aaPredicted RBP13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 XPAP23025 273 aaPredicted RBP13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 GTF2A2P52657 109 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 PDIK1LQ8N165 341 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 BCAS4Q8TDM0 211 aa13.69□□□□□ -0.22
SH3PXD2A-201ENST00000315994 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms