RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 KIF5AQ12840 1032 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 FAM153CQ494X1 144 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 WDR93Q6P2C0 686 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 PDXDC1Q6P996 788 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 CCNI2Q6ZMN8 369 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ZBTB45Q96K62 511 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 PI4K2AQ9BTU6 479 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 MED4Q9NPJ6 270 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 KMT5AQ9NQR1 393 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 FAM153AQ9UHL3 310 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 HYOU1Q9Y4L1 999 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 GLTPD2A6NH11 291 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 HNRNPDLO14979 420 aaKnown RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 FTCDO95954 541 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 SRGAP2CP0DJJ0 459 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 GUCY2CP25092 1073 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 MAGEA1P43355 309 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ACOT2P49753 483 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ZNF131P52739 623 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 POLGP54098 1239 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 GNPTABQ3T906 1256 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 TTMPQ5BVD1 217 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 CCDC181Q5TID7 509 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ICE2Q659A1 982 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 TMEM130Q8N3G9 435 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 PLEKHO2Q8TD55 490 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 RBM12Q9NTZ6 932 aaKnown RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ANKFY1Q9P2R3 1169 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 FAM169AQ9Y6X4 670 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 LOC102724159A0A0B4J2E5 919 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 SPATA31C2B4DYI2 1134 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 MYO1FO00160 1098 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 ATP2C2O75185 946 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 GNA14O95837 355 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 PSAPP07602 524 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 ABCB4P21439 1286 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 TCF7P36402 384 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 SEC24CP53992 1094 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 GUCY1A3Q02108 690 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 DMP1Q13316 513 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 PWP2Q15269 919 aaKnown RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 KIAA0753Q2KHM9 967 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 KLHDC7AQ5VTJ3 777 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 C4orf19Q8IY42 314 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 POMGNT1Q8WZA1 660 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 FAM213AQ9BRX8 229 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 XPNPEP1Q9NQW7 623 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 CYP26B1Q9NR63 512 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 HSPBP1Q9NZL4 362 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 ODF2LQ9ULJ1 636 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 NFU1Q9UMS0 254 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 PPP2R3BQ9Y5P8 575 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 EMSYQ7Z589 1322 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 A0A0G2JLL6 359 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 CNMDO75829 334 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 FECHP22830 423 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 HPDP32754 393 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 FMO5P49326 533 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 JAK3P52333 1124 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 OSTNP61366 133 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 KRT83P78385 493 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 PPATQ06203 517 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 SLC9C1Q4G0N8 1177 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 ZBTB41Q5SVQ8 909 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 NOL9Q5SY16 702 aaKnown RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 IQCEQ6IPM2 695 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 PHLDB3Q6NSJ2 640 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 ZNF746Q6NUN9 644 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 ZNF571Q7Z3V5 609 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 FRMD5Q7Z6J6 570 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 PRRT2Q7Z6L0 340 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 TADA2BQ86TJ2 420 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 CREG2Q8IUH2 290 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 TMEM161BQ8NDZ6 487 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 GPRASP2Q96D09 838 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 FAM212AQ96EL1 285 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 CAPS2Q9BXY5 557 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 POLR3FQ9H1D9 316 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-202ENST00000315962 ZNF302Q9NR11 478 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 CEP72Q9P209 647 aa8.25□□□□□ -1.09
TRIM55-202ENST00000315962 SPDYE5A6NIY4 337 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 ADRB2P07550 413 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 CARSP49589 748 aaKnown RBP8.24□□□□□ -1.09
TRIM55-202ENST00000315962 CDR1P51861 262 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 KCTD2Q14681 263 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 LLGL1Q15334 1064 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 SH3D19Q5HYK7 790 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 PAPD7Q5XG87 772 aaKnown RBP8.24□□□□□ -1.09
TRIM55-202ENST00000315962 ABHD15Q6UXT9 468 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 GBP6Q6ZN66 633 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 PHLDB2Q86SQ0 1253 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 PALB2Q86YC2 1186 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 GLYCTKQ8IVS8 523 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 METTL13Q8N6R0 699 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 SPATA4Q8NEY3 305 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 OR2W6PQ8NHA6 318 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms