RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 POTECB2RU33 542 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 DKC1O60832 514 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 DNAJC6O75061 913 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 GDF11O95390 407 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 NFKBIAP25963 317 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 PHLDB3Q6NSJ2 640 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 NCCRP1Q6ZVX7 275 aaPredicted RBP12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 SCYL3Q8IZE3 742 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 NEDD1Q8NHV4 660 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 PACSIN2Q9UNF0 486 aaPredicted RBP12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 ADM5C9JUS6 153 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 NMT2O60551 498 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 PDE5AO76074 875 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 METAP2P50579 478 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 HERVK_113P62684 666 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 ABCB5Q2M3G0 1257 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 DAAM2Q86T65 1068 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 DDX12PQ92771 950 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 FERMT2Q96AC1 680 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 IQCDQ96DY2 449 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 CYTH2Q99418 400 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 AP1M1Q9BXS5 423 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 DRC3Q9H069 523 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
LDLRAD3-201ENST00000315571 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 STX2P32856 288 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 ITIH4Q14624 930 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 NME8Q8N427 588 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 STK32AQ8WU08 396 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 SLC12A7Q9Y666 1083 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 DCDC2CA8MYV0 355 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 RNF225M0QZC1 329 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 GALK1P51570 392 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 RESP18Q5W5W9 173 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 ANKRD27Q96NW4 1050 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 FAM207AQ9NSI2 230 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 PALM3A6NDB9 673 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 PYGMP11217 842 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 LIFRP42702 1097 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 RBBP8NLQ8NC74 664 aaPredicted RBP12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 CATSPER2Q96P56 530 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 RABL2BQ9UNT1 228 aa12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
LDLRAD3-201ENST00000315571 CCDC169A6NNP5 214 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 ADCY3O60266 1144 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 TBC1D12O60347 775 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 PPP6R2O75170 966 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 ZBTB16Q05516 673 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 ZNF844Q08AG5 666 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 CYLC2Q14093 348 aaPredicted RBP12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 TAOK1Q7L7X3 1001 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 ZNF554Q86TJ5 538 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 NKX1-2Q9UD57 310 aaPredicted RBP12.52□□□□□ -0.4
LDLRAD3-201ENST00000315571 NPHP3-ACAD11A0A0J9YXS1 232 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 IPO5O00410 1097 aaKnown RBP12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 VHLP40337 213 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 PRKG1Q13976 671 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 RAB3IL1Q8TBN0 382 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 LZICQ8WZA0 190 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZNF341Q9BYN7 854 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 STMN4Q9H169 189 aaPredicted RBP12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 ABLIM1O14639 778 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 RAD51CO43502 376 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 GH2P01242 217 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 MTTPP55157 894 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 TMEM179Q6ZVK1 233 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 SIX5Q8N196 739 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 FBXL16Q8N461 479 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 TMEM237Q96Q45 408 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 CORO1BQ9BR76 489 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 GLIS2Q9BZE0 524 aaPredicted RBP12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 AZI2Q9H6S1 392 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 CLIC5Q9NZA1 410 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 PGAP2Q9UHJ9 254 aa12.52□□□□□ -0.41
LDLRAD3-201ENST00000315571 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZBTB43O43298 467 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 ENTPD5O75356 428 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms