RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 MCOLN1Q9GZU1 580 aa17.69■□□□□ 0.42
TUBB3-201ENST00000315491 CCDC113Q9H0I3 377 aa17.69■□□□□ 0.42
TUBB3-201ENST00000315491 IFT122Q9HBG6 1241 aa17.69■□□□□ 0.42
TUBB3-201ENST00000315491 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
TUBB3-201ENST00000315491 EVPLQ92817 2033 aa17.69■□□□□ 0.42
TUBB3-201ENST00000315491 ARVCFO00192 962 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 GJA8P48165 433 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 FKBP3Q00688 224 aaKnown RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 ADAMTS10Q9H324 1103 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 AGPAT3Q9NRZ7 376 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 INO80B-WBP1J3KQ70 363 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 GPR32O75388 356 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 FGFR1OPO95684 399 aaKnown RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 SNRPFP62306 86 aaKnown RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 MBTD1Q05BQ5 628 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 MAPK6Q16659 721 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 KIZQ2M2Z5 673 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 RSPH3Q86UC2 560 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 ZC3H3Q8IXZ2 948 aaKnown RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 ZNF710Q8N1W2 664 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 CCDC94Q9BW85 323 aaPredicted RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 INO80BQ9C086 356 aaPredicted RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 THAP9Q9H5L6 903 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 TRMT13Q9NUP7 481 aaKnown RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 CGNQ9P2M7 1197 aaKnown RBP17.68■□□□□ 0.42
TUBB3-201ENST00000315491 NOD1Q9Y239 953 aa17.68■□□□□ 0.42
TUBB3-201ENST00000315491 CLIC2O15247 247 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 NR3C1P04150 777 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 RPLP2P05387 115 aaKnown RBP17.67■□□□□ 0.42
TUBB3-201ENST00000315491 PRKCBP05771 671 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 ZNF18P17022 549 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 MNX1P50219 401 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-201ENST00000315491 PTK7Q13308 1070 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 NFIL3Q16649 462 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 HSP90AA4PQ58FG1 418 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 CDKAL1Q5VV42 579 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 SRGAP1Q7Z6B7 1085 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 RPAINQ86UA6 219 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 WNT8BQ93098 351 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 BICD1Q96G01 975 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 GCOM2Q9BZD3 368 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-201ENST00000315491 FZD8Q9H461 694 aa17.67■□□□□ 0.42
TUBB3-201ENST00000315491 PIGRP01833 764 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 NR2F2P24468 414 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 RPL13P26373 211 aaKnown RBP17.66■□□□□ 0.42
TUBB3-201ENST00000315491 DMTNQ08495 405 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 CEP63Q96MT8 703 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 MRPL4Q9BYD3 311 aaKnown RBP17.66■□□□□ 0.42
TUBB3-201ENST00000315491 SENP6Q9GZR1 1112 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-201ENST00000315491 MINDY3Q9H8M7 445 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 PRMT7Q9NVM4 692 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-201ENST00000315491 GINS2Q9Y248 185 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 SIP14410 1827 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 TISP43B9A030 160 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 ANKRD63C9JTQ0 380 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 HNRNPDLO14979 420 aaKnown RBP17.66■□□□□ 0.42
TUBB3-201ENST00000315491 CETN3O15182 167 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 EDN1P05305 212 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 ATP1A3P13637 1013 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 LIG4P49917 911 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 CDK7P50613 346 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 MRPS6P82932 125 aaKnown RBP17.66■□□□□ 0.42
TUBB3-201ENST00000315491 ADAM9Q13443 819 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 C12orf56Q8IXR9 622 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 EEF2KMTQ96G04 330 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 OSMRQ99650 979 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 TMEM106CQ9BVX2 250 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 TARS2Q9BW92 718 aaKnown RBP17.66■□□□□ 0.42
TUBB3-201ENST00000315491 CDHR5Q9HBB8 845 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 USP20Q9Y2K6 914 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 CENPFP49454 3210 aa17.66■□□□□ 0.42
TUBB3-201ENST00000315491 TRIP12Q14669 1992 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-201ENST00000315491 M0QZ92 97 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 ACKR2O00590 384 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 B4GALT4O60513 344 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 CDK11BP21127 795 aaKnown RBP17.65■□□□□ 0.42
TUBB3-201ENST00000315491 CRYBB1P53674 252 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-201ENST00000315491 MYBPC2Q14324 1141 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 FAM187BQ17R55 369 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 ARMCX5Q6P1M9 558 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 SLC39A4Q6P5W5 647 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 ZPBP2Q6X784 338 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 FILIP1Q7Z7B0 1213 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 IRF2BP1Q8IU81 584 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 SLC9A9Q8IVB4 645 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 FAM114A1Q8IWE2 563 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 DHX38Q92620 1227 aaKnown RBP17.65■□□□□ 0.42
TUBB3-201ENST00000315491 TRPV6Q9H1D0 765 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 MAGEC2Q9UBF1 373 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-201ENST00000315491 TRPV2Q9Y5S1 764 aa17.65■□□□□ 0.42
TUBB3-201ENST00000315491 KCNJ18B7U540 433 aa17.64■□□□□ 0.41
TUBB3-201ENST00000315491 CSDE1O75534 798 aaKnown RBP17.64■□□□□ 0.41
TUBB3-201ENST00000315491 IQCF3P0C7M6 154 aa17.64■□□□□ 0.41
TUBB3-201ENST00000315491 DARSP14868 501 aaKnown RBP17.64■□□□□ 0.41
TUBB3-201ENST00000315491 CAPN2P17655 700 aa17.64■□□□□ 0.41
TUBB3-201ENST00000315491 PLCB2Q00722 1185 aa17.64■□□□□ 0.41
TUBB3-201ENST00000315491 SPAG1Q07617 926 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms