RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SNAPC2Q13487 334 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 EPC2Q52LR7 807 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 C10orf76Q5T2E6 689 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 WDR78Q5VTH9 848 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 METTL7BQ6UX53 244 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 TMEM117Q9H0C3 514 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 SNX12Q9UMY4 172 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 POTEJP0CG39 1038 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 ANXA13P27216 316 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 STAT5BP51692 787 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 ARHGAP44Q17R89 818 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 BRDTQ58F21 947 aaPredicted RBP19.95■□□□□ 0.78
CCDC43-201ENST00000315286 ALKBH5Q6P6C2 394 aaKnown RBP19.95■□□□□ 0.78
CCDC43-201ENST00000315286 DNAAF5Q86Y56 855 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 NOA1Q8NC60 698 aaKnown RBP19.95■□□□□ 0.78
CCDC43-201ENST00000315286 SEPT1Q8WYJ6 367 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 POMGNT1Q8WZA1 660 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 CCDC127Q96BQ5 260 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 PORCNQ9H237 461 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 ANKZF1Q9H8Y5 726 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 ARGLU1Q9NWB6 273 aaPredicted RBP19.95■□□□□ 0.78
CCDC43-201ENST00000315286 DDX41Q9UJV9 622 aaKnown RBP19.95■□□□□ 0.78
CCDC43-201ENST00000315286 NENFQ9UMX5 172 aa19.95■□□□□ 0.78
CCDC43-201ENST00000315286 TULP1O00294 542 aaPredicted RBP19.94■□□□□ 0.78
CCDC43-201ENST00000315286 DDX3XO00571 662 aaKnown RBP eCLIP19.94■□□□□ 0.78
CCDC43-201ENST00000315286 HNRNPDLO14979 420 aaKnown RBP19.94■□□□□ 0.78
CCDC43-201ENST00000315286 CYP2C8P10632 490 aa19.94■□□□□ 0.78
CCDC43-201ENST00000315286 TCF7P36402 384 aaPredicted RBP19.94■□□□□ 0.78
CCDC43-201ENST00000315286 ASAP3Q8TDY4 903 aa19.94■□□□□ 0.78
CCDC43-201ENST00000315286 FBXL18Q96ME1 805 aa19.94■□□□□ 0.78
CCDC43-201ENST00000315286 ZNF408Q9H9D4 720 aa19.94■□□□□ 0.78
CCDC43-201ENST00000315286 CLEC11AQ9Y240 323 aa19.94■□□□□ 0.78
CCDC43-201ENST00000315286 GLRA2P23416 452 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 MXI1P50539 228 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 ERVK-9P63128 1117 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 TUBB4BP68371 445 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 TARBP2Q15633 366 aaKnown RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 PNMA8AQ86V59 439 aaPredicted RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 VPS36Q86VN1 386 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 ARHGEF19Q8IW93 802 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 OLIG1Q8TAK6 271 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 PARD3BQ8TEW8 1205 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 MPHOSPH6Q99547 160 aaKnown RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 POP1Q99575 1024 aaKnown RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 MROH8Q9H579 483 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 UBE2TQ9NPD8 197 aaPredicted RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 NRBP2Q9NSY0 501 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 DAAM1Q9Y4D1 1078 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 ZC3H4Q9UPT8 1303 aaKnown RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 FOXN3O00409 490 aaPredicted RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 NCK2O43639 380 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 ARL2P36404 184 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 BMS1Q14692 1282 aaKnown RBP19.93■□□□□ 0.78
CCDC43-201ENST00000315286 FAM160B1Q5W0V3 765 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 AFAP1L1Q8TED9 768 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 SLC7A3Q8WY07 619 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 BICD1Q96G01 975 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 MFSD14AQ96MC6 490 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 KCNG1Q9UIX4 513 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 USP20Q9Y2K6 914 aa19.93■□□□□ 0.78
CCDC43-201ENST00000315286 SPDYE4A6NLX3 237 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 LRRIQ3A6PVS8 624 aaPredicted RBP19.92■□□□□ 0.78
CCDC43-201ENST00000315286 H0YCG3 227 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 PDE2AO00408 941 aaPredicted RBP19.92■□□□□ 0.78
CCDC43-201ENST00000315286 PMM2O15305 246 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 PALMO75781 387 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 PRLRP16471 622 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 RFX1P22670 979 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 MAP2K1Q02750 393 aaPredicted RBP19.92■□□□□ 0.78
CCDC43-201ENST00000315286 MAP1SQ66K74 1059 aaPredicted RBP19.92■□□□□ 0.78
CCDC43-201ENST00000315286 SLC30A5Q8TAD4 765 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 LNX1Q8TBB1 728 aaPredicted RBP19.92■□□□□ 0.78
CCDC43-201ENST00000315286 TLR10Q9BXR5 811 aa19.92■□□□□ 0.78
CCDC43-201ENST00000315286 RHOXF2BP0C7M4 288 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 GARTP22102 1010 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 CKAP4Q07065 602 aaKnown RBP19.91■□□□□ 0.78
CCDC43-201ENST00000315286 HSDL1Q3SXM5 330 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 NFRKBQ6P4R8 1299 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 CREG2Q8IUH2 290 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 COG1Q8WTW3 980 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 RHOXF2Q9BQY4 288 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 SYT11Q9BT88 431 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 EFCC1Q9HA90 598 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 BTNL10A8MVZ5 291 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 RFC5P40937 340 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 NAMPTP43490 491 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 CYP24A1Q07973 514 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 CELF3Q5SZQ8 465 aaKnown RBP19.91■□□□□ 0.78
CCDC43-201ENST00000315286 KCNV1Q6PIU1 500 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 TMCO3Q6UWJ1 677 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 FBXO16Q8IX29 292 aaPredicted RBP19.91■□□□□ 0.78
CCDC43-201ENST00000315286 GPD1LQ8N335 351 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 MSANTD4Q8NCY6 345 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 TMC2Q8TDI7 906 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 U2AF1L4Q8WU68 220 aaKnown RBP19.91■□□□□ 0.78
CCDC43-201ENST00000315286 OSBPL9Q96SU4 736 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 GPR20Q99678 358 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 PCDHGC5Q9Y5F6 944 aa19.91■□□□□ 0.78
CCDC43-201ENST00000315286 LRRIQ4A6NIV6 560 aa19.9■□□□□ 0.78
CCDC43-201ENST00000315286 ABCD1P33897 745 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms