RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLC15A2Q16348 729 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 USH1GQ495M9 461 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 SLFN13Q68D06 897 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 C1orf186Q6ZWK4 172 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 AGAP11Q8TF27 550 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 SLC20A1Q8WUM9 679 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 RSRC1Q96IZ7 334 aaKnown RBP14.49□□□□□ -0.09
SKA3-202ENST00000314759 FIZ1Q96SL8 496 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 CCDC134Q9H6E4 229 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 DNAJC18Q9H819 358 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 STK24Q9Y6E0 443 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 GSTA1P08263 222 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 VIMP08670 466 aaKnown RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 CTNNA2P26232 953 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 IFNAR2P48551 515 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 KIF22Q14807 665 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 TNFAIP8L3Q5GJ75 292 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 TRAPPC3LQ5T215 181 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 FMNL3Q8IVF7 1028 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 ZFPM1Q8IX07 1006 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 RHOT2Q8IXI1 618 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 MAB21L3Q8N8X9 362 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 AGPAT1Q99943 283 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 HSD17B14Q9BPX1 270 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 SAMD15Q9P1V8 674 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 CHORDC1Q9UHD1 332 aaPredicted RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 SYNGAP1Q96PV0 1343 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 RIPK2O43353 540 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 HOXA13P31271 388 aaPredicted RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 CIITAP33076 1130 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 SCNN1DP51172 638 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 HADHBP55084 474 aaKnown RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 NFIAQ12857 509 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 CDC42EP5Q6NZY7 148 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 TRPM8Q7Z2W7 1104 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 TMEM109Q9BVC6 243 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 AMNQ9BXJ7 453 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 AGPAT3Q9NRZ7 376 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 DMAC2Q9NW81 257 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 CTTNBP2NLQ9P2B4 639 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 DBR1Q9UK59 544 aaKnown RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 FRMD4BQ9Y2L6 1034 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 FAM196BA6NMK8 535 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 TMEM110-MUSTN1A8MSY1 372 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 PODXLO00592 558 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 FTLP02792 175 aaPredicted RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 AUHQ13825 339 aaKnown RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 CCDC137Q6PK04 289 aaKnown RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 ZNF720Q7Z2F6 126 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 TPH2Q8IWU9 490 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 LMO3Q8TAP4 145 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 CERKQ8TCT0 537 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 DCAF4Q8WV16 495 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 MKL1Q969V6 931 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 HOOK2Q96ED9 719 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 ZSWIM1Q9BR11 485 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 PARVGQ9HBI0 331 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 MTRF1LQ9UGC7 380 aaKnown RBP14.48□□□□□ -0.09
SKA3-202ENST00000314759 C15orf41Q9Y2V0 281 aa14.48□□□□□ -0.09
SKA3-202ENST00000314759 TCRBV7S2A1N4TA0A589 114 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 MIF4GDA9UHW6 222 aaKnown RBP14.47□□□□□ -0.09
SKA3-202ENST00000314759 ANKRD63C9JTQ0 380 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 RIMBP2O15034 1052 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 SLITRK3O94933 977 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 HLA-DOAP06340 250 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 PEX5P50542 639 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 SLC8A3P57103 927 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 MYL7Q01449 175 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 CCDC38Q502W7 563 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 C11orf63Q6NUN7 778 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 UBL4BQ8N7F7 174 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 PRCCQ92733 491 aaPredicted RBP14.47□□□□□ -0.09
SKA3-202ENST00000314759 BCS1LQ9Y276 419 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 GREB1LQ9C091 1923 aaPredicted RBP14.47□□□□□ -0.09
SKA3-202ENST00000314759 RASGRF2O14827 1237 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 FOSP01100 380 aaPredicted RBP14.47□□□□□ -0.09
SKA3-202ENST00000314759 HSPA6P17066 643 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 CNGA2Q16280 664 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 BTNL9Q6UXG8 535 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 BZW1Q7L1Q6 419 aaKnown RBP14.47□□□□□ -0.09
SKA3-202ENST00000314759 SIAH1Q8IUQ4 282 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 RDH13Q8NBN7 331 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
SKA3-202ENST00000314759 CCDC17Q96LX7 622 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 ZNF570Q96NI8 536 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 CCDC113Q9H0I3 377 aa14.47□□□□□ -0.09
SKA3-202ENST00000314759 A8MUI8 341 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 PYGMP11217 842 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 ALAS1P13196 640 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 RARGP13631 454 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 COMTP21964 271 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 HS2ST1Q7LGA3 356 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 FBXO11Q86XK2 927 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 SPDL1Q96EA4 605 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 L3MBTL3Q96JM7 780 aaPredicted RBP14.46□□□□□ -0.09
SKA3-202ENST00000314759 PARP2Q9UGN5 583 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 PTPN22Q9Y2R2 807 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 BBOX1O75936 387 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 UBOX5O94941 541 aa14.46□□□□□ -0.09
SKA3-202ENST00000314759 GBP1P32455 592 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms