RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 KCNK18Q7Z418 384 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 NSUN4Q96CB9 384 aaKnown RBP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 PNMA5Q96PV4 448 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 PAIP2Q9BPZ3 127 aaKnown RBP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 PITPNM3Q9BZ71 974 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 UBE2OQ9C0C9 1292 aaKnown RBP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 KCNQ5Q9NR82 932 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 UBR3Q6ZT12 1888 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 FAM187AA6NFU0 413 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 GALCP54803 685 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 NONOQ15233 471 aaKnown RBP eCLIP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 FOXB2Q5VYV0 432 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 APLFQ8IW19 511 aaPredicted RBP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 RBBP8NLQ8NC74 664 aaPredicted RBP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 PNMA1Q8ND90 353 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 SLC35G2Q8TBE7 412 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 NUDT12Q9BQG2 462 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 TBC1D10AQ9BXI6 508 aa19.38■□□□□ 0.69
SPSB4-201ENST00000310546 SAP30BPQ9UHR5 308 aaKnown RBP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 BAZ2AQ9UIF9 1905 aaKnown RBP19.38■□□□□ 0.69
SPSB4-201ENST00000310546 SMAPO00193 183 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 BRAFP15056 766 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 BAG6P46379 1132 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 DHX34Q14147 1143 aaKnown RBP19.37■□□□□ 0.69
SPSB4-201ENST00000310546 CCDC6Q16204 474 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 PARP6Q2NL67 630 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 TNFAIP8L3Q5GJ75 292 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 NEK8Q86SG6 692 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 KIAA1683Q9H0B3 1180 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 LRMDAQ9H2I8 198 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.37■□□□□ 0.69
SPSB4-201ENST00000310546 NMRK1Q9NWW6 199 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 TBK1Q9UHD2 729 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 PFASO15067 1338 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 NVLO15381 856 aaKnown RBP19.37■□□□□ 0.69
SPSB4-201ENST00000310546 NAPAP54920 295 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 CACNB1Q02641 598 aaPredicted RBP19.37■□□□□ 0.69
SPSB4-201ENST00000310546 COASYQ13057 564 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 TNIP1Q15025 636 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 FAM26FQ5R3K3 315 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 BARHL2Q9NY43 387 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 STK17AQ9UEE5 414 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 DUOX1Q9NRD9 1551 aa19.37■□□□□ 0.69
SPSB4-201ENST00000310546 CYTH3O43739 400 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 GOLGA8HP0CJ92 632 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 RNF43Q68DV7 783 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 CCNJLQ8IV13 435 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 AGGF1Q8N302 714 aaeCLIP19.36■□□□□ 0.69
SPSB4-201ENST00000310546 SNX29Q8TEQ0 813 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 MAIP1Q8WWC4 291 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 LRRC37BQ96QE4 947 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 DENND2DQ9H6A0 471 aaPredicted RBP19.36■□□□□ 0.69
SPSB4-201ENST00000310546 DDX3XO00571 662 aaKnown RBP eCLIP19.36■□□□□ 0.69
SPSB4-201ENST00000310546 ZC3H18Q86VM9 953 aaKnown RBP19.36■□□□□ 0.69
SPSB4-201ENST00000310546 TBCKQ8TEA7 893 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 RBM17Q96I25 401 aaKnown RBP19.36■□□□□ 0.69
SPSB4-201ENST00000310546 TMEM109Q9BVC6 243 aa19.36■□□□□ 0.69
SPSB4-201ENST00000310546 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
SPSB4-201ENST00000310546 TTC7AQ9ULT0 858 aaPredicted RBP19.36■□□□□ 0.69
SPSB4-201ENST00000310546 DDX3YO15523 660 aaKnown RBP19.35■□□□□ 0.69
SPSB4-201ENST00000310546 RARGP13631 454 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 PPP2R5EQ16537 467 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 MFSD5Q6N075 450 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 CCDC125Q86Z20 511 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 ALG3Q92685 438 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 RAD54LQ92698 747 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 UPF1Q92900 1129 aaKnown RBP eCLIP19.35■□□□□ 0.69
SPSB4-201ENST00000310546 AKT1S1Q96B36 256 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 ZHX3Q9H4I2 956 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 EXOC3L4Q17RC7 722 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 DCAF17Q5H9S7 520 aaPredicted RBP19.35■□□□□ 0.69
SPSB4-201ENST00000310546 GJB7Q6PEY0 223 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 LRRC8CQ8TDW0 803 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 FAM136AQ96C01 138 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 GGA1Q9UJY5 639 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 CBX6O95503 412 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 GNA14O95837 355 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 USP17L8P0C7I0 530 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 SLURP2P0DP57 97 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 KCNA3P22001 575 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 DRG2P55039 364 aaKnown RBP19.35■□□□□ 0.69
SPSB4-201ENST00000310546 GTF2IP78347 998 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 MTFR1Q15390 333 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 TCERG1LQ5VWI1 586 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 IRGCQ6NXR0 463 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 CEP63Q96MT8 703 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 METTL5Q9NRN9 209 aaKnown RBP19.35■□□□□ 0.69
SPSB4-201ENST00000310546 DNAJC17Q9NVM6 304 aaKnown RBP19.35■□□□□ 0.69
SPSB4-201ENST00000310546 PPP1R1BQ9UD71 204 aaPredicted RBP19.35■□□□□ 0.69
SPSB4-201ENST00000310546 HDAC9Q9UKV0 1011 aa19.35■□□□□ 0.69
SPSB4-201ENST00000310546 GFPT2O94808 682 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 FGRP09769 529 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 RASA1P20936 1047 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 SERPINB4P48594 390 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 GNAQP50148 359 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 CALCRLQ16602 461 aa19.34■□□□□ 0.69
SPSB4-201ENST00000310546 ENDOVQ8N8Q3 282 aaKnown RBP19.34■□□□□ 0.69
SPSB4-201ENST00000310546 BICD1Q96G01 975 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms